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Report for CCDS33902.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33902.1 Public Homo sapiens 3 SENP2 24 110 108 CCDS HistoryNCBI Gene:59343Re-query CCDS DB by CCDS ID:33902.1See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33902.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000296257.10 ENSP00000296257.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000296257.10Link to Ensembl Protein Viewer:ENSP00000296257.5Re-query CCDS DB by Nucleotide ID:ENST00000296257Re-query CCDS DB by Protein ID:ENSP00000296257
Original member Current member NCBI NM_021627.3 NP_067640.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_021627.3Link to Protein Sequence:NP_067640.2Re-query CCDS DB by Nucleotide ID:NM_021627Re-query CCDS DB by Protein ID:NP_067640Link to BLAST:NP_067640.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_067640.2 589 Q9HC62-1 589 100% 0 0

Chromosomal Locations for CCDS 33902.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 185586414 185586514 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 185590114 185590169 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 185598412 185598545 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 185598958 185599024 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 185600765 185600855 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 185606330 185606498 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 185609247 185609350 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 185611651 185611745 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 185612607 185612658 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 185613345 185613408 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 185614564 185614740 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 185617480 185617611 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 185619299 185619502 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 185621826 185621905 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 185623998 185624082 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 185626298 185626393 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 185629782 185629844 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1770 nt):
ATGTACAGATGGCTGGTTAGGATTCTCGGCACCATTTTCCGTTTCTGCGACCGGTCGGTGCCCCCTGCCC
GGGCCCTCCTGAAGAGGCGGCGCTCAGACAGCACTCTGTTTTCTACAGTGGACACTGATGAAATACCAGC
CAAAAGACCAAGATTAGATTGCTTTATTCACCAAGTGAAAAACAGTCTCTACAATGCTGCCAGCTTATTT
GGATTCCCATTCCAGCTGACCACAAAGCCCATGGTAACTTCTGCTTGTAATGGAACACGGAATGTGGCCC
CTTCAGGAGAGGTATTTTCGAACTCTTCATCTTGTGAACTGACAGGTTCTGGATCCTGGAACAACATGCT
GAAACTGGGTAATAAATCTCCTAATGGAATAAGTGACTATCCAAAGATCAGAGTGACAGTTACCCGAGAT
CAGCCACGCAGAGTCCTGCCTTCCTTTGGTTTTACTTTGAACTCAGAAGGCTGTAATAGAAGACCAGGTG
GCCGTCGCCATAGCAAAGGTAATCCAGAGAGTTCTTTAATGTGGAAACCTCAGGAACAGGCTGTAACAGA
GATGATTTCTGAAGAGAGTGGCAAGGGTCTGAGGCGTCCCCATTGTACTGTGGAGGAGGGTGTTCAAAAA
GAGGAAAGAGAGAAGTACCGAAAGTTATTGGAACGACTTAAAGAAAGTGGTCATGGAAACTCTGTCTGTC
CTGTAACTTCAAATTATCACAGTTCTCAAAGAAGTCAGATGGACACATTAAAGACCAAAGGCTGGGGGGA
AGAGCAAAATCACGGAGTCAAAACAACTCAGTTTGTTCCAAAACAATATAGACTTGTTGAAACAAGGGGA
CCTCTATGTTCATTGAGAAGTGAAAAGAGGTGTTCAAAGGGGAAAATTACTGATACAGAGACGATGGTCG
GAATCAGATTTGAAAATGAAAGTAGGAGGGGATACCAACTGGAGCCTGACCTATCAGAAGAAGTGTCGGC
CCGACTCCGCCTGGGCAGTGGAAGCAATGGCTTACTCAGGAGGAAAGTGTCAATAATTGAGACAAAGGAA
AAGAATTGCTCAGGCAAAGAGAGGGACAGAAGAACGGACGATCTCCTTGAACTTACAGAGGACATGGAAA
AGGAAATCAGTAATGCCCTAGGCCATGGCCCACAGGATGAAATCCTAAGTAGTGCTTTCAAATTGCGAAT
TACTCGAGGAGATATTCAGACATTAAAGAACTATCACTGGCTCAATGATGAAGTCATTAATTTTTACATG
AATCTTCTGGTGGAAAGAAATAAAAAGCAAGGCTATCCAGCACTTCATGTATTCAGTACTTTCTTCTATC
CTAAATTAAAGTCTGGGGGTTACCAAGCAGTGAAACGATGGACCAAAGGGGTAAATCTCTTTGAACAAGA
AATTATTCTGGTGCCTATTCATCGGAAGGTACATTGGAGCCTGGTGGTGATTGACCTAAGAAAAAAGTGT
CTTAAATATCTGGATTCTATGGGACAAAAGGGCCACAGGATCTGTGAGATTCTCCTTCAGTATTTACAGG
ATGAAAGTAAGACCAAAAGAAATAGTGATCTGAATCTTTTAGAGTGGACCCATCACAGCATGAAACCACA
CGAGATTCCTCAACAGCTGAATGGGAGTGATTGTGGAATGTTTACTTGTAAATATGCAGATTATATTTCT
AGGGACAAACCTATCACATTTACTCAGCACCAGATGCCTCTCTTCCGGAAGAAGATGGTGTGGGAAATCC
TTCATCAGCAGTTGCTGTGA

Translation (589 aa):
MYRWLVRILGTIFRFCDRSVPPARALLKRRRSDSTLFSTVDTDEIPAKRPRLDCFIHQVKNSLYNAASLF
GFPFQLTTKPMVTSACNGTRNVAPSGEVFSNSSSCELTGSGSWNNMLKLGNKSPNGISDYPKIRVTVTRD
QPRRVLPSFGFTLNSEGCNRRPGGRRHSKGNPESSLMWKPQEQAVTEMISEESGKGLRRPHCTVEEGVQK
EEREKYRKLLERLKESGHGNSVCPVTSNYHSSQRSQMDTLKTKGWGEEQNHGVKTTQFVPKQYRLVETRG
PLCSLRSEKRCSKGKITDTETMVGIRFENESRRGYQLEPDLSEEVSARLRLGSGSNGLLRRKVSIIETKE
KNCSGKERDRRTDDLLELTEDMEKEISNALGHGPQDEILSSAFKLRITRGDIQTLKNYHWLNDEVINFYM
NLLVERNKKQGYPALHVFSTFFYPKLKSGGYQAVKRWTKGVNLFEQEIILVPIHRKVHWSLVVIDLRKKC
LKYLDSMGQKGHRICEILLQYLQDESKTKRNSDLNLLEWTHHSMKPHEIPQQLNGSDCGMFTCKYADYIS
RDKPITFTQHQMPLFRKKMVWEILHQQLL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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