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Report for CCDS14301.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14301.1 Public Homo sapiens X RBM3 24 110 108 CCDS HistoryNCBI Gene:5935Re-query CCDS DB by CCDS ID:14301.1See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14301.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000376755.1 ENSP00000365946.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000376755.1Link to Ensembl Protein Viewer:ENSP00000365946.1Re-query CCDS DB by Nucleotide ID:ENST00000376755Re-query CCDS DB by Protein ID:ENSP00000365946
Original member Current member EBI ENST00000376759.8 ENSP00000365950.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000376759.8Link to Ensembl Protein Viewer:ENSP00000365950.3Re-query CCDS DB by Nucleotide ID:ENST00000376759Re-query CCDS DB by Protein ID:ENSP00000365950
Original member Current member NCBI NM_006743.5 NP_006734.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_006743.5Link to Protein Sequence:NP_006734.1Re-query CCDS DB by Nucleotide ID:NM_006743Re-query CCDS DB by Protein ID:NP_006734Link to BLAST:NP_006734.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_006734.1 157 P98179 157 100% 0 0

Chromosomal Locations for CCDS 14301.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 48575181 48575283 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 48575561 48575667 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 48576314 48576419 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 48576508 48576604 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 48577026 48577086 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (474 nt):
ATGTCCTCTGAAGAAGGAAAGCTCTTCGTGGGAGGGCTCAACTTTAACACCGACGAGCAGGCACTGGAAG
ACCACTTCAGCAGTTTCGGACCTATCTCTGAGGTGGTCGTTGTCAAGGACCGGGAGACTCAGCGGTCCAG
GGGTTTTGGTTTCATCACCTTCACCAACCCAGAGCATGCTTCAGTTGCCATGAGAGCCATGAACGGAGAG
TCTCTGGATGGTCGTCAGATCCGTGTGGATCATGCAGGCAAGTCTGCTCGGGGAACCAGAGGAGGTGGCT
TTGGGGCCCATGGGCGTGGTCGCAGCTACTCTAGAGGTGGTGGGGACCAGGGCTATGGGAGTGGCAGGTA
TTATGACAGTCGACCTGGAGGGTATGGATATGGATATGGACGTTCCAGAGACTATAATGGCAGAAACCAG
GGTGGTTATGACCGCTACTCAGGAGGAAATTACAGAGACAATTATGACAACTGA

Translation (157 aa):
MSSEEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVAMRAMNGE
SLDGRQIRVDHAGKSARGTRGGGFGAHGRGRSYSRGGGDQGYGSGRYYDSRPGGYGYGYGRSRDYNGRNQ
GGYDRYSGGNYRDNYDN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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