NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS89754.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
89754.1 Public Mus musculus 4 Zfp37 23 108 98 CCDS HistoryNCBI Gene:22696Re-query CCDS DB by CCDS ID:89754.1Re-query CCDS DB by GeneID:22696See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 23, NCBI annotation release 108, Ensembl annotation release 98

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 89754.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000222748.1 ENSMUSP00000152400.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000222748.1Link to Ensembl Protein Viewer:ENSMUSP00000152400.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000222748Re-query CCDS DB by Protein ID:ENSMUSP00000152400
Original member Current member EBI ENSMUST00000220873.1 ENSMUSP00000152520.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000220873.1Link to Ensembl Protein Viewer:ENSMUSP00000152520.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000220873Re-query CCDS DB by Protein ID:ENSMUSP00000152520
Original member NCBI NM_001290353.1 NP_001277282.1 Updated not alive Link to Nucleotide Sequence:NM_001290353.1Link to Protein Sequence:NP_001277282.1Re-query CCDS DB by Nucleotide ID:NM_001290353Re-query CCDS DB by Protein ID:NP_001277282
Current member NCBI NM_001290353.2 NP_001277282.1 Accepted alive Link to Nucleotide Sequence:NM_001290353.2Link to Protein Sequence:NP_001277282.1Re-query CCDS DB by Nucleotide ID:NM_001290353Re-query CCDS DB by Protein ID:NP_001277282Link to BLAST:NP_001277282.1
Original member NCBI NM_001348347.1 NP_001335276.1 Updated not alive Link to Nucleotide Sequence:NM_001348347.1Link to Protein Sequence:NP_001335276.1Re-query CCDS DB by Nucleotide ID:NM_001348347Re-query CCDS DB by Protein ID:NP_001335276
Current member NCBI NM_001348347.2 NP_001335276.1 Accepted alive Link to Nucleotide Sequence:NM_001348347.2Link to Protein Sequence:NP_001335276.1Re-query CCDS DB by Nucleotide ID:NM_001348347Re-query CCDS DB by Protein ID:NP_001335276Link to BLAST:NP_001335276.1

Chromosomal Locations for CCDS 89754.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 4 (NC_000070.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 62191164 62192689 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 62204519 62204650 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 62205024 62205027 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1662 nt):
ATGGGAAATCAAGATCCCAAACAAGACATAGTCTCCGTGTTGGAAGAAGAAGAGCCATCATCGGGAAAGG
GGAAAAAAGCCAGCCCAAGTAGTCTGAAAAAAATAGCAAGGCCCAAGACAGCAGGAACAAGTGCAAAACT
CCAACAAGATGATGAGCATAGGGAGGAAAAGCAGAAGTCCCAAAGCAAACTTACTAAGGAAGTGACACTC
AGGAAGAAAAGTTCCAACAGCAAGAAAAGCAGTGAGTATGGTTTGTTGGAGAACAAAAGTCTCCACTCAA
AACACACTCCTTCCGAGAAAAAACTGCTTAAGTCCAGTTCCCGTGGGAAGAACTCGAATCAGAATTCAGA
CTCTCTGAAAAAGAAACCTGACACAGCTAATGACCACAGGAAATCACTCAGCCATTCTGCATCTGATGTG
AACAAAGATGAAATTCCAACTAGAAAGAAATGCGACAAGTTACCCAACAATAAGTTGTCTGATAAAGGTG
ACAAAAACCAAACCAGCAAAAAATGTGAGAAAGTATGCCGTCATAGTGCATCCCATACCAAGGAAGACAA
AATTCAGACCGGGGAGAAACGGAAATCACACTGCCGTACTCCATCTAAACCTGAAAAAGCCCCAGGTTCT
GGGAAACCTTATGAATGTAACCACTGTGGGAAGGTCCTCAGCCATAAACAGGGACTCCTTGACCATCAAA
GAACTCACACTGGGGAGAAACCATATGAATGTAATGAATGTGGGATAGCTTTCAGCCAGAAGTCCCACCT
TGTTGTACATCAGAGAACTCACACTGGGGAAAAACCATACGAGTGTGAACAGTGTGGCAAAGCACACGGA
CATAAACATGCCCTCACTGACCATCTAAGAATCCATACTGGAGAAAAGCCCTACAAATGTAATGAATGTG
GCAAAACGTTTAGACACAGCTCAAACCTTATGCAACACCTAAGATCTCACACGGGTGAGAAGCCGTATGA
ATGTAAGGAATGTGGCAAATCCTTTAGATATAATTCATCTCTTACTGAACATGTGAGAACACACACAGGT
GAAATACCATACGAATGTAACGAATGTGGCAAAGCTTTCAAGTATGGCTCATCCCTGACTAAACATATGC
GGATTCATACAGGGGAGAAACCATTTGAATGTAATGAATGTGGGAAAACTTTTAGCAAAAAGTCACACCT
AGTTATACATCAAAGAACTCATACAAAGGAGAAACCTTATAAATGTGATGAGTGTGGGAAAGCCTTTGGA
CATAGCTCATCTCTTACCTACCATATGAGAACTCATACAGGTGACTGCCCCTTTGAATGTAATCAATGTG
GTAAGGCCTTTAAACAGATTGAAGGCCTTACCCAACACCAGAGAGTTCACACAGGGGAGAAACCCTATGA
GTGTGTTGAATGTGGGAAAGCCTTTAGTCAGAAGTCACACCTCATCGTACACCAGAGAACTCATACAGGG
GAGAAACCCTTTGAATGTTATGAGTGTGGAAAAGCCTTCAATGCAAAATCACAACTTGTTATTCATCAGA
GATCCCACACTGGAGAGAAACCCTATGAATGTATTGAATGTGGTAAAGCCTTCAAGCAAAATGCCTCTCT
TACCAAACATATGAAAATTCACTCAGAAGAACAATCTGAGGAAGAAGATTAA

Translation (553 aa):
MGNQDPKQDIVSVLEEEEPSSGKGKKASPSSLKKIARPKTAGTSAKLQQDDEHREEKQKSQSKLTKEVTL
RKKSSNSKKSSEYGLLENKSLHSKHTPSEKKLLKSSSRGKNSNQNSDSLKKKPDTANDHRKSLSHSASDV
NKDEIPTRKKCDKLPNNKLSDKGDKNQTSKKCEKVCRHSASHTKEDKIQTGEKRKSHCRTPSKPEKAPGS
GKPYECNHCGKVLSHKQGLLDHQRTHTGEKPYECNECGIAFSQKSHLVVHQRTHTGEKPYECEQCGKAHG
HKHALTDHLRIHTGEKPYKCNECGKTFRHSSNLMQHLRSHTGEKPYECKECGKSFRYNSSLTEHVRTHTG
EIPYECNECGKAFKYGSSLTKHMRIHTGEKPFECNECGKTFSKKSHLVIHQRTHTKEKPYKCDECGKAFG
HSSSLTYHMRTHTGDCPFECNQCGKAFKQIEGLTQHQRVHTGEKPYECVECGKAFSQKSHLIVHQRTHTG
EKPFECYECGKAFNAKSQLVIHQRSHTGEKPYECIECGKAFKQNASLTKHMKIHSEEQSEEED


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH