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Report for CCDS24361.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
24361.1 Public Mus musculus 11 Rnf185 23 108 98 CCDS HistoryNCBI Gene:193670Re-query CCDS DB by CCDS ID:24361.1Re-query CCDS DB by GeneID:193670See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 24361.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000064364.2 ENSMUSP00000067053.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000064364.2Link to Ensembl Protein Viewer:ENSMUSP00000067053.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000064364Re-query CCDS DB by Protein ID:ENSMUSP00000067053
Original member Current member NCBI NM_145355.5 NP_663330.2 Accepted alive Link to Nucleotide Sequence:NM_145355.5Link to Protein Sequence:NP_663330.2Re-query CCDS DB by Nucleotide ID:NM_145355Re-query CCDS DB by Protein ID:NP_663330Link to BLAST:NP_663330.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_663330.2 228 Q91YT2-2 228 100% 0 0

Chromosomal Locations for CCDS 24361.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 3417990 3418087 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 3419862 3419979 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 3425282 3425336 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 3426566 3426678 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 3428884 3428902 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 3432400 3432620 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 3438205 3438267 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (687 nt):
ATGTGTATCCTCCTCTGCCCTCACATGTTCTGCAGACCTATCAATCAACGCCAAGCAGACTGGGATTGTC
TTGAGAATCTTCCCTGGAAGCTTTGCTGGCAAGCAGCCATGGCAAGTAAAGGGCCTTCGGCCTCTGCATC
CACTGAGAATTCCAATGCAGGGGGGCCCAGTGGCAGCAGCAATGGCACTGGTGAGAGTGGAGGGCAGGAC
AGCACCTTTGAGTGCAACATATGCCTGGACACAGCCAAGGATGCTGTCATCAGCCTGTGTGGCCACCTCT
TCTGTTGGCCGTGTTTACATCAGTGGTTGGAGACTAGGCCTAACAGACAAGTGTGTCCAGTCTGCAAAGC
TGGCATCAGCCGAGACAAAGTCATCCCCCTCTATGGCAGAGGCAGCACTGGACAGCAGGATCCCAGAGAG
AAGACTCCTCCTCGTCCTCAAGGCCAGAGGCCAGAGCCAGAAAATAGAGGGGGATTTCAAGGATTTGGAT
TTGGAGATGGTGGCTTTCAGATGTCTTTTGGAATTGGAGCATTTCCATTTGGGATATTTGCCACAGCATT
TAACATAAATGATGGACGGCCTCCTCCAGCTGTCCCTGGGACACCCCAGTATGTGGATGAGCAGTTCCTG
TCACGCCTCTTCCTGTTTGTCGCCCTGGTGATCATGTTCTGGCTCCTGATCGCCTAA

Translation (228 aa):
MCILLCPHMFCRPINQRQADWDCLENLPWKLCWQAAMASKGPSASASTENSNAGGPSGSSNGTGESGGQD
STFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKVIPLYGRGSTGQQDPRE
KTPPRPQGQRPEPENRGGFQGFGFGDGGFQMSFGIGAFPFGIFATAFNINDGRPPPAVPGTPQYVDEQFL
SRLFLFVALVIMFWLLIA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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