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Report for CCDS16633.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
16633.1 Public Mus musculus 2 Adal 23 108 98 CCDS HistoryNCBI Gene:75894Re-query CCDS DB by CCDS ID:16633.1Re-query CCDS DB by GeneID:75894See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 16633.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000066155.5 ENSMUSP00000067133.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000066155.5Link to Ensembl Protein Viewer:ENSMUSP00000067133.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000066155Re-query CCDS DB by Protein ID:ENSMUSP00000067133
Original member Current member EBI ENSMUST00000119031.7 ENSMUSP00000113052.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000119031.7Link to Ensembl Protein Viewer:ENSMUSP00000113052.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000119031Re-query CCDS DB by Protein ID:ENSMUSP00000113052
Original member Current member NCBI NM_029475.2 NP_083751.1 Accepted alive Link to Nucleotide Sequence:NM_029475.2Link to Protein Sequence:NP_083751.1Re-query CCDS DB by Nucleotide ID:NM_029475Re-query CCDS DB by Protein ID:NP_083751Link to BLAST:NP_083751.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_083751.1 360 Q80SY6-1 360 100% 0 0

Chromosomal Locations for CCDS 16633.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 121142244 121142303 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 121142524 121142654 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 121143149 121143209 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 121146033 121146120 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 121148241 121148322 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 121150220 121150346 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 121151131 121151211 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 121152430 121152568 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 121154719 121154819 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 121155335 121155547 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1083 nt):
ATGGAGGCCGGACAGCAGTGGCCTGGGAAGACAGACTTTTATCTGCAATTACCAAAAGTGGAGCTCCATG
CCCACTTGAATGGCTCCATTAGTTCCAGTACCATGAAGAAACTGATAGCCAAGAAGCCACATCTTAACGT
TCATGGTCACATGACCATGATTGACAAGGGGAAGAAAAGGACTTTACAAGAATGTTTCCAGATGTTCCAA
GTTATACATCAGCTTACTACTAGTGCTGAGGACATCCTGATGGTCACAAAAGACGTCATTAAGGAATTTG
CAGATGATGGTGTCAAGTACCTGGAGCTGAGGAGCACTCCCAGAGAAGAAAATGCTACTGGAATGACTAG
GAAGACTTACGTGGAATCCGTCCTTGAAGGCATAAAACAATGCAAACAGGAAAACTTAGATATTGATGTT
AGGTATTTGATGGCAATTGACAGAAGAGGTGGCCCAACAATAGCCAGGGAGACTGTCGAACTTGCTAAAG
AGTTCTTCCTCTCTACTGAGAATACAGTTCTTGGCCTTGACCTCAGTGGAGATCCAACTATAGGACAAGC
TAACGACTTCTTGGAGCCTCTTTTAGAAGCTAAAAAAGCAGGTCTGAAGTTGGCATTGCATCTTGCCGAG
ATTCCAAACAGGGAAAAAGAAAATCAGATGCTGCTGAGTCTGCTCCCTGACAGAATTGGGCATGGGACAT
TCCTTAGCGCCTCTGAGGCAGGGGCCCTGGACCAAGTGGACTTCGTGAGGCAACACCAGATACCCCTCGA
ACTTTGTTTGACCTCAAACATCAAAAGCCAGACAGTCCCTTCTTATGATCAGCATCACTTTGGATTTTGG
TACAGCATTGCTCATCCTTCTGTGATCTGTACTGATGATAAAGGTGTTTTTGCGACATACCTTTCTCAAG
AATATCAACTGGCAGCAGAAACATTTAATTTGACCCCATTTCAGGTGTGGGATCTGTCCTATGAATCCAT
CAACTACATCTTTGCTTGTGACAACACCAGATCTGAACTGAGAAAAAGGTGGACTCACTTGAAGCAGAAA
GTGTTAAACTGTAATGAGGTGAACTACTTTTGA

Translation (360 aa):
MEAGQQWPGKTDFYLQLPKVELHAHLNGSISSSTMKKLIAKKPHLNVHGHMTMIDKGKKRTLQECFQMFQ
VIHQLTTSAEDILMVTKDVIKEFADDGVKYLELRSTPREENATGMTRKTYVESVLEGIKQCKQENLDIDV
RYLMAIDRRGGPTIARETVELAKEFFLSTENTVLGLDLSGDPTIGQANDFLEPLLEAKKAGLKLALHLAE
IPNREKENQMLLSLLPDRIGHGTFLSASEAGALDQVDFVRQHQIPLELCLTSNIKSQTVPSYDQHHFGFW
YSIAHPSVICTDDKGVFATYLSQEYQLAAETFNLTPFQVWDLSYESINYIFACDNTRSELRKRWTHLKQK
VLNCNEVNYF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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