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Report for CCDS72331.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
72331.1 Public Mus musculus X Wdr45 23 108 98 CCDS HistoryNCBI Gene:54636Re-query CCDS DB by CCDS ID:72331.1Re-query CCDS DB by GeneID:54636See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 16, NCBI annotation release 104, Ensembl annotation release 75

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 72331.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000115688.7 ENSMUSP00000111352.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000115688.7Link to Ensembl Protein Viewer:ENSMUSP00000111352.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000115688Re-query CCDS DB by Protein ID:ENSMUSP00000111352
Original member NCBI NM_001290795.1 NP_001277724.1 Updated not alive Link to Nucleotide Sequence:NM_001290795.1Link to Protein Sequence:NP_001277724.1Re-query CCDS DB by Nucleotide ID:NM_001290795Re-query CCDS DB by Protein ID:NP_001277724
Current member NCBI NM_001290795.2 NP_001277724.1 Accepted alive Link to Nucleotide Sequence:NM_001290795.2Link to Protein Sequence:NP_001277724.1Re-query CCDS DB by Nucleotide ID:NM_001290795Re-query CCDS DB by Protein ID:NP_001277724Link to BLAST:NP_001277724.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001277724.1 346 Q91VM3-2 346 100% 0 0

Chromosomal Locations for CCDS 72331.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome X (NC_000086.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 7723866 7723920 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 7724024 7724098 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 7724187 7724291 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 7725931 7726036 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 7726198 7726292 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 7726686 7726765 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 7726878 7727086 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 7727212 7727271 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 7727347 7727492 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 7727750 7727859 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1041 nt):
ATGACTCAGCAGCCACTTCGAGGTGTGACCAGCCTACATTTCAACCAAGACCAAAGCTGCTTTTGCTGCG
CCATGGAGACAGGCGTCCGGATCTACAATGTGGAGCCACTTATGGAGAAGGGGCATCTTGACCACGAGCA
GGTAGGCAGCGTGGGCCTGGTAGAGATGCTGCACCGATCCAACCTGCTGGCCCTGGTGGGCGGTGGGAGC
AGCCCCAAGTTCTCTGAGATCTCAGTGCTGATCTGGGACGATGCCCGAGAAGGCAAGGACTCCAAGGACA
AACTGGTGCTGGAGTTCACCTTCACCAAGCCAGTGCTGGCTGTGCGCATGCGCCATGACAAGATCGTGAT
TGTGCTGAGGAACCGCATCTATGTGTACTCCTTCCCTGACAGTCCAAGAAAGCTGTTTGAGTTTGACACT
CGGGACAACCCCAAGGGGCTGTGTGACCTCTGTCCAAGCCTGGAGAAGCAGCTGCTCGTGTTTCCTGGAC
ACAAGTGTGGAAGTCTGCAACTTGTGGATCTCGCAAGCACAAAGCCTGGTACTTCGTCGGCGCCATTCAC
TATCAATGCACATCAGAGTGATGTGGCCTGTGTGTCCCTGAACCAGCCAGGCACTGTAGTGGCGTCAGCC
TCCCAGAAGGGCACCCTTATTCGTCTCTTTGATACCCAATCCAAGGAAAAGCTGGTAGAGCTTCGAAGAG
GCACCGACCCTGCCACCCTGTACTGTGACAAGGGCACTGTCCACATCTTCGCTCTTAAAGACACCCGCCT
TAACCGCCGCTCTGCGCTGGCTCGTGTGGGCAAAGTGGGACCTATGATTGGGCAATACGTGGACTCTCAG
TGGAGCCTGGCCAGCTTTACTGTGCCTGCTGAGTCAGCCTGCATCTGCGCCTTTGGTCGAAATACTTCCA
AGAATGTCAATTCTGTAATTGCCATCTGTGTAGATGGGACCTTCCACAAATATGTCTTCACTCCTGATGG
AAACTGCAACAGAGAGGCCTTTGACGTGTACCTTGACATCTGTGATGACGAGGACTTCTAA

Translation (346 aa):
MTQQPLRGVTSLHFNQDQSCFCCAMETGVRIYNVEPLMEKGHLDHEQVGSVGLVEMLHRSNLLALVGGGS
SPKFSEISVLIWDDAREGKDSKDKLVLEFTFTKPVLAVRMRHDKIVIVLRNRIYVYSFPDSPRKLFEFDT
RDNPKGLCDLCPSLEKQLLVFPGHKCGSLQLVDLASTKPGTSSAPFTINAHQSDVACVSLNQPGTVVASA
SQKGTLIRLFDTQSKEKLVELRRGTDPATLYCDKGTVHIFALKDTRLNRRSALARVGKVGPMIGQYVDSQ
WSLASFTVPAESACICAFGRNTSKNVNSVIAICVDGTFHKYVFTPDGNCNREAFDVYLDICDDEDF


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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