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Report for CCDS43562.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
43562.1 Public Homo sapiens 7 CREB5 24 110 108 CCDS HistoryNCBI Gene:9586Re-query CCDS DB by CCDS ID:43562.1Re-query CCDS DB by GeneID:9586See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 43562.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000396299.6 ENSP00000379593.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000396299.6Link to Ensembl Protein Viewer:ENSP00000379593.2Re-query CCDS DB by Nucleotide ID:ENST00000396299Re-query CCDS DB by Protein ID:ENSP00000379593
Original member Current member EBI ENST00000409603.5 ENSP00000387197.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000409603.5Link to Ensembl Protein Viewer:ENSP00000387197.1Re-query CCDS DB by Nucleotide ID:ENST00000409603Re-query CCDS DB by Protein ID:ENSP00000387197
Original member Current member NCBI NM_182899.5 NP_878902.2 Accepted alive Link to Nucleotide Sequence:NM_182899.5Link to Protein Sequence:NP_878902.2Re-query CCDS DB by Nucleotide ID:NM_182899Re-query CCDS DB by Protein ID:NP_878902Link to BLAST:NP_878902.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_878902.2 475 Q02930-3 475 100% 0 0

Chromosomal Locations for CCDS 43562.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 28494930 28494999 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28507616 28507737 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28570365 28570537 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28718753 28718879 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28724222 28724332 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28804199 28804522 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28809187 28809414 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28818071 28818179 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28819116 28819279 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1428 nt):
ATGATTCATAGGCACAAACATGAAATGACTTTGAAGTTTCCTTCAATAAAAACAGACAATATGTTATCAG
ATCAAACTCCGACCCCAACGAGATTCCTGAAGAACTGCGAGGAGGTGGGCCTCTTCAGCGAGCTGGACTG
CTCCCTGGAGCACGAGTTCAGGAAGGCTCAGGAAGAGGAGAGCAGCAAGCGGAATATCTCGATGCATAAT
GCAGTTGGTGGGGCCATGACGGGGCCCGGAACTCACCAGCTTAGCAGCGCTCGGCTGCCCAACCATGACA
CCAACGTTGTGATTCAGCAAGCCATGCCGTCGCCTCAGTCCAGCTCTGTCATCACTCAGGCACCTTCCAC
CAACCGCCAGATCGGGCCTGTCCCAGGCTCTCTATCTTCTCTGCTACATCTCCACAACAGACAGAGACAG
CCCATGCCAGCCTCCATGCCTGGGACCCTGCCCAACCCTACAATGCCAGGATCTTCCGCCGTCTTGATGC
CAATGGAGCGACAAATGTCAGTGAACTCCAGCATCATGGGGATGCAAGGTCCAAATCTCAGCAACCCCTG
TGCTTCTCCCCAGGTCCAGCCAATGCATTCAGAAGCCAAAATGAGGTTGAAGGCTGCATTGACTCACCAC
CCTGCTGCCATGTCAAATGGGAACATGAACACCATGGGACACATGATGGAGATGATGGGCTCCCGGCAGG
ACCAGACGCCACACCATCACATGCACTCGCACCCGCATCAGCACCAGACACTGCCACCCCATCACCCTTA
CCCACACCAGCACCAGCACCCAGCACACCATCCTCACCCTCAACCCCATCACCAGCAGAACCATCCACAT
CACCACTCCCATTCCCACCTTCATGCACACCCAGCACATCACCAGACCTCGCCACATCCGCCCCTGCACA
CCGGCAACCAAGCACAGGTTTCACCAGCAACACAACAGATGCAGCCAACCCAGACAATACAGCCACCCCA
GCCCACAGGGGGGCGCCGGCGAAGGGTGGTAGACGAGGATCCGGACGAGAGGCGGCGGAAATTTCTGGAA
CGGAACCGGGCAGCTGCCACCCGCTGCAGACAGAAGAGGAAGGTCTGGGTGATGTCATTGGAAAAGAAAG
CAGAAGAACTCACCCAGACAAACATGCAGCTTCAGAATGAAGTGTCTATGTTGAAAAATGAGGTGGCCCA
GCTGAAACAGTTGTTGTTAACACATAAAGACTGCCCAATAACAGCCATGCAGAAAGAATCACAAGGATAT
CTAAGTCCAGAGAGTAGCCCTCCTGCTAGTCCTGTCCCAGCTTGCTCCCAGCAACAAGTCATCCAGCATA
ATACCATCACTACTTCCTCATCGGTCAGCGAGGTGGTAGGAAGCTCCACCCTCAGCCAGCTCACCACTCA
CAGAACAGACCTGAATCCGATTCTTTAA

Translation (475 aa):
MIHRHKHEMTLKFPSIKTDNMLSDQTPTPTRFLKNCEEVGLFSELDCSLEHEFRKAQEEESSKRNISMHN
AVGGAMTGPGTHQLSSARLPNHDTNVVIQQAMPSPQSSSVITQAPSTNRQIGPVPGSLSSLLHLHNRQRQ
PMPASMPGTLPNPTMPGSSAVLMPMERQMSVNSSIMGMQGPNLSNPCASPQVQPMHSEAKMRLKAALTHH
PAAMSNGNMNTMGHMMEMMGSRQDQTPHHHMHSHPHQHQTLPPHHPYPHQHQHPAHHPHPQPHHQQNHPH
HHSHSHLHAHPAHHQTSPHPPLHTGNQAQVSPATQQMQPTQTIQPPQPTGGRRRRVVDEDPDERRRKFLE
RNRAAATRCRQKRKVWVMSLEKKAEELTQTNMQLQNEVSMLKNEVAQLKQLLLTHKDCPITAMQKESQGY
LSPESSPPASPVPACSQQQVIQHNTITTSSSVSEVVGSSTLSQLTTHRTDLNPIL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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