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Report for CCDS3468.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
3468.1 Public Homo sapiens 4 GUF1 24 110 108 CCDS HistoryNCBI Gene:60558Re-query CCDS DB by CCDS ID:3468.1See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 3468.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000281543.6 ENSP00000281543.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000281543.6Link to Ensembl Protein Viewer:ENSP00000281543.5Re-query CCDS DB by Nucleotide ID:ENST00000281543Re-query CCDS DB by Protein ID:ENSP00000281543
Original member Current member NCBI NM_021927.3 NP_068746.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_021927.3Link to Protein Sequence:NP_068746.2Re-query CCDS DB by Nucleotide ID:NM_021927Re-query CCDS DB by Protein ID:NP_068746Link to BLAST:NP_068746.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_068746.2 669 Q8N442 669 100% 0 0

Chromosomal Locations for CCDS 3468.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 44678623 44678787 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 44680441 44680552 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 44680694 44680842 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 44681123 44681203 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 44682334 44682411 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 44683235 44683318 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 44685959 44686023 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 44686510 44686713 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 44688007 44688146 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 44689286 44689409 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 44689843 44689975 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 44690717 44690860 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 44691666 44691799 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 44694412 44694513 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 44695615 44695734 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 44697408 44697444 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 44698544 44698681 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2010 nt):
ATGTGGACCCTCGTGGGTCGGGGCTGGGGGTGCGCACGCGCTCTCGCGCCACGAGCCACTGGGGCCGCGC
TTCTGGTGGCCCCGGGGCCCCGGTCCGCGCCGACCCTTGGGGCTGCTCCAGAGTCCTGGGCTACCGACAG
GCTCTACAGCTCCGCAGAATTCAAGGAAAAACTTGACATGTCTAGGTTTCCTGTTGAAAATATTAGAAAT
TTCAGTATTGTTGCACACGTGGATCATGGCAAAAGTACTTTAGCTGACAGGCTCCTAGAACTTACAGGGA
CAATTGATAAAACAAAGAATAATAAGCAGGTTCTTGATAAATTGCAAGTGGAACGAGAAAGAGGAATCAC
TGTTAAAGCACAGACAGCATCTCTCTTTTACAATTGTGAAGGAAAGCAGTACCTTTTAAATCTCATTGAT
ACACCGGGCCATGTTGATTTTAGTTATGAAGTATCCAGGTCACTTTCTGCTTGCCAGGGTGTTTTACTTG
TGGTTGATGCAAATGAGGGAATTCAAGCCCAAACTGTAGCAAACTTCTTTCTTGCCTTCGAAGCACAGCT
ATCGGTAATTCCAGTTATAAATAAGATAGATCTGAAGAATGCTGATCCTGAAAGGGTTGAAAACCAAATT
GAGAAAGTGTTTGATATTCCAAGTGATGAATGTATTAAGATTTCTGCTAAACTTGGAACAAATGTTGAGA
GTGTTCTTCAGGCAATTATTGAAAGAATCCCCCCTCCTAAAGTGCATCGCAAAAATCCTCTGAGAGCTTT
GGTATTTGACTCCACCTTTGACCAGTATAGAGGTGTGATAGCCAATGTAGCATTATTTGACGGAGTGGTT
TCCAAAGGAGATAAAATTGTATCTGCACATACTCAAAAGACATACGAAGTTAATGAAGTAGGAGTCTTGA
ATCCTAATGAGCAGCCAACTCATAAATTATATGCAGGACAGGTGGGCTATCTGATTGCTGGGATGAAAGA
TGTCACTGAAGCGCAAATAGGAGATACATTATGTTTACATAAGCAACCAGTGGAGCCCTTGCCTGGGTTT
AAATCAGCGAAACCAATGGTATTTGCAGGAATGTATCCTCTAGACCAATCTGAATATAACAATCTGAAGA
GTGCTATAGAAAAACTGACTTTAAATGATTCCAGTGTGACCGTTCATCGGGATAGTAGCCTTGCTCTGGG
TGCTGGCTGGAGGCTAGGATTTCTTGGACTTTTGCACATGGAAGTTTTCAACCAGCGACTGGAGCAAGAA
TATAATGCTTCTGTTATTTTAACAACCCCTACTGTTCCATATAAAGCTGTACTGTCATCATCAAAATTGA
TAAAGGAACATAGAGAAAAAGAAATTACAATTATCAATCCTGCACAATTCCCCGATAAATCAAAAGTAAC
AGAATATTTGGAGCCAGTTGTTTTGGGCACTATTATCACACCAGATGAATACACTGGAAAAATAATGATG
CTTTGCGAGGCTCGAAGAGCAGTTCAGAAGAATATGATATTTATTGATCAAAATAGAGTTATGCTTAAAT
ATCTCTTTCCTTTGAATGAAATTGTGGTAGATTTTTATGACTCTTTGAAATCCCTATCTTCTGGATATGC
TAGTTTTGATTACGAAGATGCAGGCTACCAGACTGCAGAACTTGTAAAAATGGATATTCTACTGAATGGA
AATACTGTAGAGGAGCTAGTAACTGTTGTACACAAAGACAAAGCTCATTCAATTGGCAAAGCCATATGTG
AACGGCTGAAGGATTCTCTTCCTAGGCAACTGTTTGAGATAGCAATTCAAGCTGCTATTGGAAGTAAAAT
CATTGCAAGAGAAACTGTGAAAGCCTATAGGAAAAACGTTTTGGCAAAATGTTATGGTGGTGATATTACC
CGAAAAATGAAGCTTTTGAAGAGACAAGCAGAAGGGAAAAAAAAGCTGAGGAAAATTGGCAACGTTGAAG
TTCCAAAAGATGCTTTTATAAAAGTTCTGAAAACACAATCTTCTAAATAA

Translation (669 aa):
MWTLVGRGWGCARALAPRATGAALLVAPGPRSAPTLGAAPESWATDRLYSSAEFKEKLDMSRFPVENIRN
FSIVAHVDHGKSTLADRLLELTGTIDKTKNNKQVLDKLQVERERGITVKAQTASLFYNCEGKQYLLNLID
TPGHVDFSYEVSRSLSACQGVLLVVDANEGIQAQTVANFFLAFEAQLSVIPVINKIDLKNADPERVENQI
EKVFDIPSDECIKISAKLGTNVESVLQAIIERIPPPKVHRKNPLRALVFDSTFDQYRGVIANVALFDGVV
SKGDKIVSAHTQKTYEVNEVGVLNPNEQPTHKLYAGQVGYLIAGMKDVTEAQIGDTLCLHKQPVEPLPGF
KSAKPMVFAGMYPLDQSEYNNLKSAIEKLTLNDSSVTVHRDSSLALGAGWRLGFLGLLHMEVFNQRLEQE
YNASVILTTPTVPYKAVLSSSKLIKEHREKEITIINPAQFPDKSKVTEYLEPVVLGTIITPDEYTGKIMM
LCEARRAVQKNMIFIDQNRVMLKYLFPLNEIVVDFYDSLKSLSSGYASFDYEDAGYQTAELVKMDILLNG
NTVEELVTVVHKDKAHSIGKAICERLKDSLPRQLFEIAIQAAIGSKIIARETVKAYRKNVLAKCYGGDIT
RKMKLLKRQAEGKKKLRKIGNVEVPKDAFIKVLKTQSSK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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