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Report for CCDS12481.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12481.1 Public Homo sapiens 19 KIRREL2 24 110 108 CCDS HistoryNCBI Gene:84063Re-query CCDS DB by CCDS ID:12481.1Re-query CCDS DB by GeneID:84063See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12481.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000360202.10 ENSP00000353331.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000360202.10Link to Ensembl Protein Viewer:ENSP00000353331.4Re-query CCDS DB by Nucleotide ID:ENST00000360202Re-query CCDS DB by Protein ID:ENSP00000353331
Original member Current member NCBI NM_199180.4 NP_954649.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_199180.4Link to Protein Sequence:NP_954649.3Re-query CCDS DB by Nucleotide ID:NM_199180Re-query CCDS DB by Protein ID:NP_954649Link to BLAST:NP_954649.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_954649.3 708 Q6UWL6-1 708 100% 0 0

Chromosomal Locations for CCDS 12481.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 35857120 35857180 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35857345 35857494 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35858408 35858557 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35858704 35858864 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35859481 35859631 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35860297 35860402 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35860519 35860667 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35860909 35861036 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35861122 35861254 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35861541 35861641 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35861805 35862024 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35862493 35862597 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35862927 35863036 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35864648 35864713 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35866157 35866492 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2127 nt):
ATGCTCAGGATGCGGGTCCCCGCCCTCCTCGTCCTCCTCTTCTGCTTCAGAGGGAGAGCAGGCCCGTCGC
CCCATTTCCTGCAACAGCCAGAGGACCTGGTGGTGCTGCTGGGGGAGGAAGCCCGGCTGCCGTGTGCTCT
GGGCGCCTACTGGGGGCTAGTTCAGTGGACTAAGAGTGGGCTGGCCCTAGGGGGCCAAAGGGACCTACCA
GGGTGGTCCCGGTACTGGATATCAGGGAATGCAGCCAATGGCCAGCATGACCTCCACATTAGGCCCGTGG
AGCTAGAGGATGAAGCATCATATGAATGTCAGGCTACACAAGCAGGCCTCCGCTCCAGACCAGCCCAACT
GCACGTGCTGGTCCCCCCAGAAGCCCCCCAGGTGCTGGGCGGCCCCTCTGTGTCTCTGGTTGCTGGAGTT
CCTGCGAACCTGACATGTCGGAGCCGTGGGGATGCCCGCCCTACCCCTGAATTGCTGTGGTTCCGAGATG
GGGTCCTGTTGGATGGAGCCACCTTCCATCAGACCCTGCTGAAGGAAGGGACCCCTGGGTCAGTGGAGAG
CACCTTAACCCTGACCCCTTTCAGCCATGATGATGGAGCCACCTTTGTCTGCCGGGCCCGGAGCCAGGCC
CTGCCCACAGGAAGAGACACAGCTATCACACTGAGCCTGCAGTACCCCCCAGAGGTGACTCTGTCTGCTT
CGCCACACACTGTGCAGGAGGGAGAGAAGGTCATTTTCCTGTGCCAGGCCACAGCCCAGCCTCCTGTCAC
AGGCTACAGGTGGGCAAAAGGGGGCTCTCCGGTGCTCGGGGCCCGCGGGCCAAGGTTAGAGGTCGTGGCA
GACGCCTCGTTCCTGACTGAGCCCGTGTCCTGCGAGGTCAGCAACGCCGTGGGTAGCGCCAACCGCAGTA
CTGCGCTGGATGTGCTGTTTGGGCCGATTCTGCAGGCAAAGCCGGAGCCCGTGTCCGTGGACGTGGGGGA
AGACGCTTCCTTCAGCTGCGCCTGGCGCGGGAACCCGCTTCCACGGGTAACCTGGACCCGCCGCGGTGGC
GCGCAGGTGCTGGGCTCTGGAGCCACACTGCGTCTTCCGTCGGTGGGGCCCGAGGACGCAGGCGACTATG
TGTGCAGAGCTGAGGCTGGGCTATCGGGCCTGCGGGGCGGCGCCGCGGAGGCTCGGCTGACTGTGAACGC
TCCCCCAGTAGTGACCGCCCTGCACTCTGCGCCTGCCTTCCTGAGGGGCCCTGCTCGCCTCCAGTGTCTG
GTTTTCGCCTCTCCCGCCCCAGATGCCGTGGTCTGGTCTTGGGATGAGGGCTTCCTGGAGGCGGGGTCGC
AGGGCCGGTTCCTGGTGGAGACATTCCCTGCCCCAGAGAGCCGCGGGGGACTGGGTCCGGGCCTGATCTC
TGTGCTACACATTTCGGGGACCCAGGAGTCTGACTTTAGCAGGAGCTTTAACTGCAGTGCCCGGAACCGG
CTGGGCGAGGGAGGTGCCCAGGCCAGCCTGGGCCGTAGAGACTTGCTGCCCACTGTGCGGATAGTGGCCG
GAGTGGCCGCTGCCACCACAACTCTCCTTATGGTCATCACTGGGGTGGCCCTCTGCTGCTGGCGCCACAG
CAAGGCCTCAGCCTCTTTCTCCGAGCAAAAGAACCTGATGCGAATCCCTGGCAGCAGCGACGGCTCCAGT
TCACGAGGTCCTGAAGAAGAGGAGACAGGCAGCCGCGAGGACCGGGGCCCCATTGTGCACACTGACCACA
GTGATCTGGTTCTGGAGGAGGAAGGGACTCTGGAGACCAAGGACCCAACCAACGGTTACTACAAGGTCCG
AGGAGTCAGTGTGAGCCTGAGCCTTGGCGAAGCCCCTGGAGGAGGTCTCTTCCTGCCACCACCCTCCCCC
CTTGGGCCCCCAGGGACCCCTACCTTCTATGACTTCAACCCACACCTGGGCATGGTCCCCCCCTGCAGAC
TTTACAGAGCCAGGGCAGGCTATCTCACCACACCCCACCCTCGAGCTTTCACCAGCTACATCAAACCCAC
ATCCTTTGGGCCCCCAGATCTGGCCCCCGGGACTCCCCCCTTCCCATATGCTGCCTTCCCCACACCTAGC
CACCCGCGTCTCCAGACTCACGTGTGA

Translation (708 aa):
MLRMRVPALLVLLFCFRGRAGPSPHFLQQPEDLVVLLGEEARLPCALGAYWGLVQWTKSGLALGGQRDLP
GWSRYWISGNAANGQHDLHIRPVELEDEASYECQATQAGLRSRPAQLHVLVPPEAPQVLGGPSVSLVAGV
PANLTCRSRGDARPTPELLWFRDGVLLDGATFHQTLLKEGTPGSVESTLTLTPFSHDDGATFVCRARSQA
LPTGRDTAITLSLQYPPEVTLSASPHTVQEGEKVIFLCQATAQPPVTGYRWAKGGSPVLGARGPRLEVVA
DASFLTEPVSCEVSNAVGSANRSTALDVLFGPILQAKPEPVSVDVGEDASFSCAWRGNPLPRVTWTRRGG
AQVLGSGATLRLPSVGPEDAGDYVCRAEAGLSGLRGGAAEARLTVNAPPVVTALHSAPAFLRGPARLQCL
VFASPAPDAVVWSWDEGFLEAGSQGRFLVETFPAPESRGGLGPGLISVLHISGTQESDFSRSFNCSARNR
LGEGGAQASLGRRDLLPTVRIVAGVAAATTTLLMVITGVALCCWRHSKASASFSEQKNLMRIPGSSDGSS
SRGPEEEETGSREDRGPIVHTDHSDLVLEEEGTLETKDPTNGYYKVRGVSVSLSLGEAPGGGLFLPPPSP
LGPPGTPTFYDFNPHLGMVPPCRLYRARAGYLTTPHPRAFTSYIKPTSFGPPDLAPGTPPFPYAAFPTPS
HPRLQTHV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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