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Report for CCDS48692.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
48692.1 Public Mus musculus 10 Taf7l2 23 108 98 CCDS HistoryNCBI Gene:619332Re-query CCDS DB by CCDS ID:48692.1See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 48692.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000099261.2 ENSMUSP00000096867.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000099261.2Link to Ensembl Protein Viewer:ENSMUSP00000096867.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000099261Re-query CCDS DB by Protein ID:ENSMUSP00000096867
Original member Current member NCBI NM_001161855.1 NP_001155327.1 Accepted alive Link to Nucleotide Sequence:NM_001161855.1Link to Protein Sequence:NP_001155327.1Re-query CCDS DB by Nucleotide ID:NM_001161855Re-query CCDS DB by Protein ID:NP_001155327Link to BLAST:NP_001155327.1

Chromosomal Locations for CCDS 48692.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 116112483 116113619 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1137 nt):
ATGAGCAAAAGCCGAGATGAACCGCCTCACGAACTCGAGAACCAGTTCATACTGCGGCTGCCCCCAGAAC
AGGCTTCGGCGGTCAGGAAGATCATCCGTTCTGGAAATGCCGCCATGAGAGAGAAACTAAAAATCGACTT
GTCTCCCGATTCACGCCGTGCCGTCGTTCAGGTAGATGGCGTCTCACTGTCTGCCAAACTTGTCGATTTG
CCTTGTGTTATTGGAAGCCTGAAAACGCACGATGGGAAAACCTTTTATAAAACAGCCGATGTGTCCCAGA
TGCTATTGTGCAGCGCCGATGATGGTGATCCCCACACGTCCCCAGAAGAGCCAGCTACCTCTGCTGGTGC
TACTGTAGTGGGAAACAAAAAGGAAGCAGAGGGAAAATATATCTGGAAGCATGGCATTACTCCACCACTT
AAGAACGTCAGAAAGAAACGGTTTCGCAAACCAACAAAAAAGCCCGCCGATATGAAGCAAGGCGAAGAAA
GCTGTAGGGCCTACATTGATTCCAAAGATGTGGAAAAGGAAGTGAAGAGGCTGCTGCGCTCAGATGCTGA
AGCCATCAGCAGCCGATGGGAAGTCGTTGTTGATGATGAAACCAAGGCAGTACCAAGTCAAACCTGCACT
TCACACGTTCCGTTGCCCCCTGAAGCAGGTGATCATACCTCATCAGCATGTGCTATGCCTCAGAGCACAT
TCAGTGATTCCAGCAGTGGCAAAGATGATCCAGAGAATAAAGATGAGGAGGAGGAAGAAGAAAAAGAGGA
GAAGGAAGAAGAGGATGAGGATGAGGAGGATGAAGAGGAGGAAGAGGAAGAAGAGGAAGATGATTCTGAA
GAAGACCTGGAAAGAGAGCTACAAGCCAAGTTTATTGAGTTTAGCTTGTGTGAAGCTAATGAAAGTAGCA
GTTCAGTAATTCTTGGAATTCAGAAGCTGATTCATTCCAAGGAGAGAAAACTCCAAGAGATCCAGGCCAA
AGCACAGAGGCAGAAAGATCTCCTCAGAAAATTGGAAAACCTGACCCTCAAGAGTCATTTCCAGTCTGTG
CTAGATCAGCTCAAGTTACAGGAGAAGCAGAAGTATGAACAGATCCTTTTTCTACAGGAACAACTGAAGT
GTTTTTTGAAGAAGTAA

Translation (378 aa):
MSKSRDEPPHELENQFILRLPPEQASAVRKIIRSGNAAMREKLKIDLSPDSRRAVVQVDGVSLSAKLVDL
PCVIGSLKTHDGKTFYKTADVSQMLLCSADDGDPHTSPEEPATSAGATVVGNKKEAEGKYIWKHGITPPL
KNVRKKRFRKPTKKPADMKQGEESCRAYIDSKDVEKEVKRLLRSDAEAISSRWEVVVDDETKAVPSQTCT
SHVPLPPEAGDHTSSACAMPQSTFSDSSSGKDDPENKDEEEEEEKEEKEEEDEDEEDEEEEEEEEEDDSE
EDLERELQAKFIEFSLCEANESSSSVILGIQKLIHSKERKLQEIQAKAQRQKDLLRKLENLTLKSHFQSV
LDQLKLQEKQKYEQILFLQEQLKCFLKK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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