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Report for CCDS29514.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
29514.1 Public Mus musculus 19 Ppp1r14b 23 108 98 CCDS HistoryNCBI Gene:18938Re-query CCDS DB by CCDS ID:29514.1Re-query CCDS DB by GeneID:18938See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 29514.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000070850.7 ENSMUSP00000064129.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000070850.7Link to Ensembl Protein Viewer:ENSMUSP00000064129.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000070850Re-query CCDS DB by Protein ID:ENSMUSP00000064129
Original member Current member NCBI NM_008889.2 NP_032915.2 Accepted alive Link to Nucleotide Sequence:NM_008889.2Link to Protein Sequence:NP_032915.2Re-query CCDS DB by Nucleotide ID:NM_008889Re-query CCDS DB by Protein ID:NP_032915Link to BLAST:NP_032915.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_032915.2 147 Q62084 147 100% 0 0

Chromosomal Locations for CCDS 29514.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 19 (NC_000085.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 6975249 6975506 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 6976544 6976627 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 6976858 6976890 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 6976982 6977050 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (444 nt):
ATGGCGGACAGCGGCCCCGCGGGGGGCGCGGCGTTAGCTGCCCCGGCCCCCGGGCCGGGCAGTGGCAGCA
CAGGGCCCCGAGTCTACTTCCAGAGTCCCCCTGGGGCCGCAGGCGAAGGCCCGGGGGGCGCTGATGACGA
TGGCCCGGTGAGACGGCAAGGGAAGGTCACCGTCAAGTACGACCGCAAGGAGCTACGGAAGCGCCTCAAC
CTGGAGGAGTGGATTTTAGAACAGCTCACGCGACTCTACGACTGCCAGGAGGAGGAGATCCCGGAGCTCG
AGATAGATGTGGATGAACTTTTAGACATGGAGAGTGATGATACCCGGGCTGCTAGGGTCAAGGAGCTGTT
AGTTGACTGTTACAAACCCACTGAGGCCTTCATCTCTGGCCTGCTGGACAAGATCCGGGGCATGCAGAAG
CTGAGCACACCCCAGAAGAAATGA

Translation (147 aa):
MADSGPAGGAALAAPAPGPGSGSTGPRVYFQSPPGAAGEGPGGADDDGPVRRQGKVTVKYDRKELRKRLN
LEEWILEQLTRLYDCQEEEIPELEIDVDELLDMESDDTRAARVKELLVDCYKPTEAFISGLLDKIRGMQK
LSTPQKK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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