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Report for CCDS31832.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31832.1 Public Homo sapiens 12 RPS26 24 110 108 CCDS HistoryNCBI Gene:6231Re-query CCDS DB by CCDS ID:31832.1See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31832.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000356464.10 ENSP00000348849.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000356464.10Link to Ensembl Protein Viewer:ENSP00000348849.5Re-query CCDS DB by Nucleotide ID:ENST00000356464Re-query CCDS DB by Protein ID:ENSP00000348849
Original member Current member EBI ENST00000552361.1 ENSP00000450339.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000552361.1Link to Ensembl Protein Viewer:ENSP00000450339.1Re-query CCDS DB by Nucleotide ID:ENST00000552361Re-query CCDS DB by Protein ID:ENSP00000450339
Original member Current member EBI ENST00000646449.2 ENSP00000496643.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000646449.2Link to Ensembl Protein Viewer:ENSP00000496643.1Re-query CCDS DB by Nucleotide ID:ENST00000646449Re-query CCDS DB by Protein ID:ENSP00000496643
Original member Current member NCBI NM_001029.5 NP_001020.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001029.5Link to Protein Sequence:NP_001020.2Re-query CCDS DB by Nucleotide ID:NM_001029Re-query CCDS DB by Protein ID:NP_001020Link to BLAST:NP_001020.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001020.2 115 P62854 115 100% 0 0

Chromosomal Locations for CCDS 31832.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 56042167 56042169 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 56042425 56042602 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 56043363 56043493 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 56044119 56044154 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (348 nt):
ATGACAAAGAAAAGAAGGAACAATGGTCGTGCCAAAAAGGGCCGCGGCCACGTGCAGCCTATTCGCTGCA
CTAACTGTGCCCGATGCGTGCCCAAGGACAAGGCCATTAAGAAATTCGTCATTCGAAACATAGTGGAGGC
CGCAGCAGTCAGGGACATTTCTGAAGCGAGCGTCTTCGATGCCTATGTGCTTCCCAAGCTGTATGTGAAG
CTACATTACTGTGTGAGTTGTGCAATTCACAGCAAAGTAGTCAGGAATCGATCTCGTGAAGCCCGCAAGG
ACCGAACACCCCCACCCCGATTTAGACCTGCGGGTGCTGCCCCACGTCCCCCACCAAAGCCCATGTAA

Translation (115 aa):
MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVK
LHYCVSCAIHSKVVRNRSREARKDRTPPPRFRPAGAAPRPPPKPM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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