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Report for CCDS86084.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
86084.2 Public Homo sapiens 10 ZNF487 24 110 108 CCDS HistoryNCBI Gene:642819Re-query CCDS DB by CCDS ID:86084.2See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)


Attributes
CDS uses downstream AUG

Sequence IDs included in CCDS 86084.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000437590.4 ENSP00000392335.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000437590.4Link to Ensembl Protein Viewer:ENSP00000392335.2Re-query CCDS DB by Nucleotide ID:ENST00000437590Re-query CCDS DB by Protein ID:ENSP00000392335
Original member Current member EBI ENST00000652684.1 ENSP00000498527.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000652684.1Link to Ensembl Protein Viewer:ENSP00000498527.1Re-query CCDS DB by Nucleotide ID:ENST00000652684Re-query CCDS DB by Protein ID:ENSP00000498527
Original member Current member EBI ENST00000689627.1 ENSP00000510544.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000689627.1Link to Ensembl Protein Viewer:ENSP00000510544.1Re-query CCDS DB by Nucleotide ID:ENST00000689627Re-query CCDS DB by Protein ID:ENSP00000510544
Original member Current member NCBI NM_001355444.3 NP_001342373.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001355444.3Link to Protein Sequence:NP_001342373.2Re-query CCDS DB by Nucleotide ID:NM_001355444Re-query CCDS DB by Protein ID:NP_001342373Link to BLAST:NP_001342373.2
Original member Current member NCBI NM_001355445.3 NP_001342374.2 Accepted alive Link to Nucleotide Sequence:NM_001355445.3Link to Protein Sequence:NP_001342374.2Re-query CCDS DB by Nucleotide ID:NM_001355445Re-query CCDS DB by Protein ID:NP_001342374Link to BLAST:NP_001342374.2
Original member Current member NCBI NM_001355446.3 NP_001342375.2 Accepted alive Link to Nucleotide Sequence:NM_001355446.3Link to Protein Sequence:NP_001342375.2Re-query CCDS DB by Nucleotide ID:NM_001355446Re-query CCDS DB by Protein ID:NP_001342375Link to BLAST:NP_001342375.2

Chromosomal Locations for CCDS 86084.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 43475814 43475847 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 43476107 43476202 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 43481429 43481922 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (624 nt):
ATGCTGGAGAACTACAGCCTCCTCCTCTCAGTGGGATATTGCATTACCAAACCAGAGGTGGTTTGCAAGT
TGGAGCATGGACAGGTGCTGTGGATATTAGAGGAAGAGTCCCCAAGTCAGAGCCACCTAGACTGCTGCAT
AGATGATGACCTGATGGAGAAGAGACAGGAAAATCAAGACCAGCATTTGCAGAAAGTTGATTTTGTCAAC
AATAAAACACTGACTATGGACAGAAATGGTGTATTAGGAAAAACATTTTCTCTTGACACAAACCCCATTC
TATCAAGAAAAATACGTGGCAACTGTGACTCATCTGGAATGAATTTGAATAATATTTCAGAATTAATTAT
TAGTAATAGAAGCTCCTTTGTAAGGAACCCTGCTGAGTGTAATGTACGTGGGAAATTTCTCCTCTGTATG
AAGCGTGAGAATCCTTATGCCAGAGGGAAACCTTTGGAATATGATGGAAATGGGAAAGCCGTCTCTCAGA
ATGAGGACTTATTTAGGCATCAGTATATTCAAACTCTTAAGCAGTGTTTTGAATACAATCAGTGTGGGAA
GGCTTTTCATGAAGAGGCAGCCTGCAGTACCCATAAGAGAGTGTGCTCATGGGAGACCCTGTGA

Translation (207 aa):
MLENYSLLLSVGYCITKPEVVCKLEHGQVLWILEEESPSQSHLDCCIDDDLMEKRQENQDQHLQKVDFVN
NKTLTMDRNGVLGKTFSLDTNPILSRKIRGNCDSSGMNLNNISELIISNRSSFVRNPAECNVRGKFLLCM
KRENPYARGKPLEYDGNGKAVSQNEDLFRHQYIQTLKQCFEYNQCGKAFHEEAACSTHKRVCSWETL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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