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Report for CCDS10715.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10715.1 Public Homo sapiens 16 RUSF1 24 110 108 CCDS HistoryNCBI Gene:64755Re-query CCDS DB by CCDS ID:10715.1See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10715.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000327237.7 ENSP00000317579.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000327237.7Link to Ensembl Protein Viewer:ENSP00000317579.2Re-query CCDS DB by Nucleotide ID:ENST00000327237Re-query CCDS DB by Protein ID:ENSP00000317579
Original member Current member EBI ENST00000430477.6 ENSP00000398074.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000430477.6Link to Ensembl Protein Viewer:ENSP00000398074.3Re-query CCDS DB by Nucleotide ID:ENST00000430477Re-query CCDS DB by Protein ID:ENSP00000398074
Original member Current member NCBI NM_022744.4 NP_073581.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_022744.4Link to Protein Sequence:NP_073581.2Re-query CCDS DB by Nucleotide ID:NM_022744Re-query CCDS DB by Protein ID:NP_073581Link to BLAST:NP_073581.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_073581.2 468 Q96GQ5-1 468 100% 0 0

Chromosomal Locations for CCDS 10715.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 31490835 31490932 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 31492009 31492086 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 31492197 31492340 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 31492978 31493048 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 31493467 31493524 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 31493603 31493787 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 31493866 31493936 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 31496849 31496950 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 31499302 31499407 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 31499493 31499525 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 31500686 31500731 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 31507764 31507878 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 31508074 31508373 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1407 nt):
ATGGCTGACGACGCGGGTTTGGAGACCCCGCTGTGTTCCGAGCAGTTCGGCTCCGGGGAGGCACGGGGCT
GCCGCGCCGCCGCGGACGGGAGCCTGCAGTGGGAGGTCGGGGGCTGGCGCTGGTGGGGGCTCTCCAGGGC
CTTCACGGTCAAACCTGAAGGACGAGATGCGGGCGAAGTGGGGGCTTCCGGGGCCCCCTCACCGCCCCTC
TCCGGGCTCCAGGCCGTGTTCCTGCCTCAGGGCTTCCCTGATAGCGTCAGCCCGGACTACTTGCCCTACC
AGCTGTGGGATTCCGTGCAGGCGTTTGCTTCCAGCCTCTCCGGCTCCCTAGCCACCCAGGCAGTCTTGCT
GGGCATAGGGGTGGGGAACGCAAAAGCCACTGTTTCAGCTGCCACGGCCACCTGGCTCGTGAAAGATTCA
ACTGGCATGCTGGGCCGCATCGTCTTTGCCTGGTGGAAAGGGAGCAAACTGGACTGCAATGCCAAGCAGT
GGAGGCTTTTTGCGGACATCCTCAATGACGTAGCCATGTTCCTTGAGATTATGGCTCCTGTATACCCAAT
CTGTTTCACCATGACCGTCTCCACCAGCAACCTAGCCAAGTGCATCGTGAGTGTTGCTGGTGGGGCCACT
CGGGCTGCCCTGACCGTGCACCAGGCTCGGAGGAACAACATGGCTGACGTGTCAGCCAAGGACAGCAGCC
AGGAGACGCTGGTGAACCTGGCGGGGCTCTTGGTCAGCCTCCTGATGCTCCCTCTGGTGTCAGGTTGCCC
TGGCTTCAGCCTTGGATGTTTCTTCTTCCTCACTGCCCTCCACATCTACGCCAACTACCGCGCGGTCCGA
GCCCTGGTCATGGAGACCTTGAACGAAGGCCGGCTCCGGCTGGTCCTGAAGCACTACCTTCAGAGGGGAG
AGGTACTCGACCCAACTGCAGCCAATCGCATGGAGCCGCTGTGGACAGGTTTCTGGCCAGCTCCGTCTCT
ATCCCTGGGGGTCCCCTTACACCGCTTGGTCTCCAGTGTCTTTGAGCTGCAGCAGCTGGTTGAGGGGCAC
CAAGAATCCTACCTCCTCTGCTGGGACCAGTCACAAAACCAGGTACAGGTAGTTCTGAACCAGAAGGCAG
GCCCCAAGACCATCCTAAGGGCCGCCACACATGGGCTGATGCTTGGGGCCCTGCAGGGAGATGGACCCCT
TCCAGCAGAGCTGGAGGAGCTGAGGAACCGGGTGCGGGCAGGTCCTAAGAAAGAGAGCTGGGTCGTCGTC
AAGGAGACACACGAAGTGTTGGACATGCTGTTCCCAAAGTTCTTGAAAGGACTGCAGGATGCCGGCTGGA
AGACCGAGAAGCACCAGCTAGAGGTGGATGAGTGGAGGGCCACATGGCTTCTGTCTCCCGAAAAGAAGGT
CTTGTGA

Translation (468 aa):
MADDAGLETPLCSEQFGSGEARGCRAAADGSLQWEVGGWRWWGLSRAFTVKPEGRDAGEVGASGAPSPPL
SGLQAVFLPQGFPDSVSPDYLPYQLWDSVQAFASSLSGSLATQAVLLGIGVGNAKATVSAATATWLVKDS
TGMLGRIVFAWWKGSKLDCNAKQWRLFADILNDVAMFLEIMAPVYPICFTMTVSTSNLAKCIVSVAGGAT
RAALTVHQARRNNMADVSAKDSSQETLVNLAGLLVSLLMLPLVSGCPGFSLGCFFFLTALHIYANYRAVR
ALVMETLNEGRLRLVLKHYLQRGEVLDPTAANRMEPLWTGFWPAPSLSLGVPLHRLVSSVFELQQLVEGH
QESYLLCWDQSQNQVQVVLNQKAGPKTILRAATHGLMLGALQGDGPLPAELEELRNRVRAGPKKESWVVV
KETHEVLDMLFPKFLKGLQDAGWKTEKHQLEVDEWRATWLLSPEKKVL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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