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Report for CCDS453.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
453.1 Public Homo sapiens 1 EXO5 24 110 108 CCDS HistoryNCBI Gene:64789Re-query CCDS DB by CCDS ID:453.1See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 453.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000296380.9 ENSP00000296380.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000296380.9Link to Ensembl Protein Viewer:ENSP00000296380.4Re-query CCDS DB by Nucleotide ID:ENST00000296380Re-query CCDS DB by Protein ID:ENSP00000296380
Original member Current member EBI ENST00000358527.6 ENSP00000351328.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000358527.6Link to Ensembl Protein Viewer:ENSP00000351328.2Re-query CCDS DB by Nucleotide ID:ENST00000358527Re-query CCDS DB by Protein ID:ENSP00000351328
Original member Current member EBI ENST00000372703.1 ENSP00000361788.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000372703.1Link to Ensembl Protein Viewer:ENSP00000361788.1Re-query CCDS DB by Nucleotide ID:ENST00000372703Re-query CCDS DB by Protein ID:ENSP00000361788
Original member Current member EBI ENST00000418186.2 ENSP00000391240.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000418186.2Link to Ensembl Protein Viewer:ENSP00000391240.2Re-query CCDS DB by Nucleotide ID:ENST00000418186Re-query CCDS DB by Protein ID:ENSP00000391240
Original member Current member EBI ENST00000419161.2 ENSP00000392115.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000419161.2Link to Ensembl Protein Viewer:ENSP00000392115.2Re-query CCDS DB by Nucleotide ID:ENST00000419161Re-query CCDS DB by Protein ID:ENSP00000392115
Original member Current member EBI ENST00000420209.2 ENSP00000398437.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000420209.2Link to Ensembl Protein Viewer:ENSP00000398437.2Re-query CCDS DB by Nucleotide ID:ENST00000420209Re-query CCDS DB by Protein ID:ENSP00000398437
Original member Current member EBI ENST00000443729.6 ENSP00000409715.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000443729.6Link to Ensembl Protein Viewer:ENSP00000409715.2Re-query CCDS DB by Nucleotide ID:ENST00000443729Re-query CCDS DB by Protein ID:ENSP00000409715
Original member Current member EBI ENST00000415550.6 ENSP00000413565.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000415550.6Link to Ensembl Protein Viewer:ENSP00000413565.2Re-query CCDS DB by Nucleotide ID:ENST00000415550Re-query CCDS DB by Protein ID:ENSP00000413565
Original member Current member EBI ENST00000432259.6 ENSP00000416857.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000432259.6Link to Ensembl Protein Viewer:ENSP00000416857.2Re-query CCDS DB by Nucleotide ID:ENST00000432259Re-query CCDS DB by Protein ID:ENSP00000416857
Original member Current member EBI ENST00000682383.1 ENSP00000508270.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000682383.1Link to Ensembl Protein Viewer:ENSP00000508270.1Re-query CCDS DB by Nucleotide ID:ENST00000682383Re-query CCDS DB by Protein ID:ENSP00000508270
Original member Current member NCBI NM_001346946.2 NP_001333875.1 Accepted alive Link to Nucleotide Sequence:NM_001346946.2Link to Protein Sequence:NP_001333875.1Re-query CCDS DB by Nucleotide ID:NM_001346946Re-query CCDS DB by Protein ID:NP_001333875Link to BLAST:NP_001333875.1
Original member Current member NCBI NM_001346947.2 NP_001333876.1 Accepted alive Link to Nucleotide Sequence:NM_001346947.2Link to Protein Sequence:NP_001333876.1Re-query CCDS DB by Nucleotide ID:NM_001346947Re-query CCDS DB by Protein ID:NP_001333876Link to BLAST:NP_001333876.1
Original member Current member NCBI NM_001346948.2 NP_001333877.1 Accepted alive Link to Nucleotide Sequence:NM_001346948.2Link to Protein Sequence:NP_001333877.1Re-query CCDS DB by Nucleotide ID:NM_001346948Re-query CCDS DB by Protein ID:NP_001333877Link to BLAST:NP_001333877.1
Original member Current member NCBI NM_001346949.2 NP_001333878.1 Accepted alive Link to Nucleotide Sequence:NM_001346949.2Link to Protein Sequence:NP_001333878.1Re-query CCDS DB by Nucleotide ID:NM_001346949Re-query CCDS DB by Protein ID:NP_001333878Link to BLAST:NP_001333878.1
Original member Current member NCBI NM_001346950.2 NP_001333879.1 Accepted alive Link to Nucleotide Sequence:NM_001346950.2Link to Protein Sequence:NP_001333879.1Re-query CCDS DB by Nucleotide ID:NM_001346950Re-query CCDS DB by Protein ID:NP_001333879Link to BLAST:NP_001333879.1
Original member Current member NCBI NM_001346951.2 NP_001333880.1 Accepted alive Link to Nucleotide Sequence:NM_001346951.2Link to Protein Sequence:NP_001333880.1Re-query CCDS DB by Nucleotide ID:NM_001346951Re-query CCDS DB by Protein ID:NP_001333880Link to BLAST:NP_001333880.1
Original member Current member NCBI NM_001346952.2 NP_001333881.1 Accepted alive Link to Nucleotide Sequence:NM_001346952.2Link to Protein Sequence:NP_001333881.1Re-query CCDS DB by Nucleotide ID:NM_001346952Re-query CCDS DB by Protein ID:NP_001333881Link to BLAST:NP_001333881.1
Original member Current member NCBI NM_001346953.2 NP_001333882.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001346953.2Link to Protein Sequence:NP_001333882.1Re-query CCDS DB by Nucleotide ID:NM_001346953Re-query CCDS DB by Protein ID:NP_001333882Link to BLAST:NP_001333882.1
Original member Current member NCBI NM_001346954.2 NP_001333883.1 Accepted alive Link to Nucleotide Sequence:NM_001346954.2Link to Protein Sequence:NP_001333883.1Re-query CCDS DB by Nucleotide ID:NM_001346954Re-query CCDS DB by Protein ID:NP_001333883Link to BLAST:NP_001333883.1
Original member Current member NCBI NM_001346955.2 NP_001333884.1 Accepted alive Link to Nucleotide Sequence:NM_001346955.2Link to Protein Sequence:NP_001333884.1Re-query CCDS DB by Nucleotide ID:NM_001346955Re-query CCDS DB by Protein ID:NP_001333884Link to BLAST:NP_001333884.1
Original member Current member NCBI NM_001346956.2 NP_001333885.1 Accepted alive Link to Nucleotide Sequence:NM_001346956.2Link to Protein Sequence:NP_001333885.1Re-query CCDS DB by Nucleotide ID:NM_001346956Re-query CCDS DB by Protein ID:NP_001333885Link to BLAST:NP_001333885.1
Original member Current member NCBI NM_022774.3 NP_073611.1 Accepted alive Link to Nucleotide Sequence:NM_022774.3Link to Protein Sequence:NP_073611.1Re-query CCDS DB by Nucleotide ID:NM_022774Re-query CCDS DB by Protein ID:NP_073611Link to BLAST:NP_073611.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001333875.1 373 Q9H790 373 100% 0 0
NP_001333876.1 373 Q9H790 373 100% 0 0
NP_001333877.1 373 Q9H790 373 100% 0 0
NP_001333878.1 373 Q9H790 373 100% 0 0
NP_001333879.1 373 Q9H790 373 100% 0 0
NP_001333880.1 373 Q9H790 373 100% 0 0
NP_001333881.1 373 Q9H790 373 100% 0 0
NP_001333882.1 373 Q9H790 373 100% 0 0
NP_001333883.1 373 Q9H790 373 100% 0 0
NP_001333884.1 373 Q9H790 373 100% 0 0
NP_001333885.1 373 Q9H790 373 100% 0 0
NP_073611.1 373 Q9H790 373 100% 0 0

Chromosomal Locations for CCDS 453.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 40514545 40515666 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1122 nt):
ATGGCAGAGACAAGAGAAGAGGAGACAGTGTCAGCAGAAGCCTCAGGGTTCTCAGACTTGAGTGACTCAG
AGTTCCTGGAGTTTCTGGACCTAGAAGATGCCCAAGAGTCAAAGGCTTTAGTTAACATGCCTGGCCCATC
TTCTGAATCCCTTGGGAAGGATGACAAACCCATAAGCTTACAAAACTGGAAAAGAGGATTGGATATATTA
TCACCCATGGAGAGATTCCACCTTAAATATTTATATGTCACTGACCTGGCTACTCAGAACTGGTGTGAAC
TGCAAACAGCATATGGGAAGGAGCTTCCTGGTTTCTTGGCACCTGAGAAGGCAGCTGTGTTGGACACTGG
TGCCAGCATACACCTAGCTAGAGAACTAGAACTTCATGATCTTGTGACTGTCCCAGTCACCACTAAAGAA
GATGCTTGGGCAATTAAGTTTCTGAACATACTTTTGCTGATTCCTACCCTGCAGTCAGAAGGGCACATCA
GAGAGTTTCCAGTGTTTGGGGAAGGGGAGGGTGTACTTCTTGTTGGAGTGATTGATGAGCTGCACTATAC
AGCCAAGGGGGAACTGGAGCTGGCGGAACTCAAGACACGCAGGCGCCCTATGCTCCCTCTGGAAGCTCAG
AAGAAGAAAGACTGTTTTCAAGTCAGCCTATACAAATATATCTTTGATGCCATGGTACAAGGAAAAGTGA
CCCCTGCTAGCCTAATCCACCACACAAAGTTGTGTCTAGAAAAGCCACTGGGGCCATCAGTGCTGAGGCA
TGCCCAGCAGGGAGGCTTCTCTGTGAAGTCTTTGGGTGACCTCATGGAACTTGTCTTCTTGTCTCTAACA
CTGTCAGACCTCCCAGTTATTGATATCTTGAAGATTGAGTATATCCACCAAGAGACTGCCACTGTGCTGG
GTACTGAGATTGTAGCCTTCAAAGAGAAGGAGGTGAGAGCCAAGGTGCAGCATTATATGGCCTACTGGAT
GGGCCACCGAGAGCCCCAGGGAGTTGACGTGGAGGAGGCTTGGAAGTGCCGGACGTGTACCTATGCAGAC
ATTTGTGAGTGGAGAAAGGGCAGTGGAGTGCTCAGCTCTACACTGGCGCCCCAAGTCAAAAAAGCCAAAT
GA

Translation (373 aa):
MAETREEETVSAEASGFSDLSDSEFLEFLDLEDAQESKALVNMPGPSSESLGKDDKPISLQNWKRGLDIL
SPMERFHLKYLYVTDLATQNWCELQTAYGKELPGFLAPEKAAVLDTGASIHLARELELHDLVTVPVTTKE
DAWAIKFLNILLLIPTLQSEGHIREFPVFGEGEGVLLVGVIDELHYTAKGELELAELKTRRRPMLPLEAQ
KKKDCFQVSLYKYIFDAMVQGKVTPASLIHHTKLCLEKPLGPSVLRHAQQGGFSVKSLGDLMELVFLSLT
LSDLPVIDILKIEYIHQETATVLGTEIVAFKEKEVRAKVQHYMAYWMGHREPQGVDVEEAWKCRTCTYAD
ICEWRKGSGVLSSTLAPQVKKAK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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