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Report for CCDS8586.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8586.1 Public Homo sapiens 12 SLC2A3 24 110 108 CCDS HistoryNCBI Gene:6515Re-query CCDS DB by CCDS ID:8586.1See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8586.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000075120.12 ENSP00000075120.7 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000075120.12Link to Ensembl Protein Viewer:ENSP00000075120.7Re-query CCDS DB by Nucleotide ID:ENST00000075120Re-query CCDS DB by Protein ID:ENSP00000075120
Original member Current member NCBI NM_006931.3 NP_008862.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_006931.3Link to Protein Sequence:NP_008862.1Re-query CCDS DB by Nucleotide ID:NM_006931Re-query CCDS DB by Protein ID:NP_008862Link to BLAST:NP_008862.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_008862.1 496 P11169 496 100% 0 0

Chromosomal Locations for CCDS 8586.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 7921413 7921631 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 7922821 7923024 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 7924410 7924511 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 7925844 7925948 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 7929684 7929871 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 7930480 7930642 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 7931245 7931485 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 7932987 7933147 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 7933810 7933902 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 7936020 7936034 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1491 nt):
ATGGGGACACAGAAGGTCACCCCAGCTCTGATATTTGCCATCACAGTTGCTACAATCGGCTCTTTCCAAT
TTGGCTACAACACTGGGGTCATCAATGCTCCTGAGAAGATCATAAAGGAATTTATCAATAAAACTTTGAC
GGACAAGGGAAATGCCCCACCCTCTGAGGTGCTGCTCACGTCTCTCTGGTCCTTGTCTGTGGCCATATTT
TCCGTCGGGGGTATGATCGGCTCCTTTTCCGTCGGACTCTTCGTCAACCGCTTTGGCAGGCGCAATTCAA
TGCTGATTGTCAACCTGTTGGCTGTCACTGGTGGCTGCTTTATGGGACTGTGTAAAGTAGCTAAGTCGGT
TGAAATGCTGATCCTGGGTCGCTTGGTTATTGGCCTCTTCTGCGGACTCTGCACAGGTTTTGTGCCCATG
TACATTGGAGAGATCTCGCCTACTGCCCTGCGGGGTGCCTTTGGCACTCTCAACCAGCTGGGCATCGTTG
TTGGAATTCTGGTGGCCCAGATCTTTGGTCTGGAATTCATCCTTGGGTCTGAAGAGCTATGGCCGCTGCT
ACTGGGTTTTACCATCCTTCCTGCTATCCTACAAAGTGCAGCCCTTCCATTTTGCCCTGAAAGTCCCAGA
TTTTTGCTCATTAACAGAAAAGAAGAGGAGAATGCTAAGCAGATCCTCCAGCGGTTGTGGGGCACCCAGG
ATGTATCCCAAGACATCCAGGAGATGAAAGATGAGAGTGCAAGGATGTCACAAGAAAAGCAAGTCACCGT
GCTAGAGCTCTTTAGAGTGTCCAGCTACCGACAGCCCATCATCATTTCCATTGTGCTCCAGCTCTCTCAG
CAGCTCTCTGGGATCAATGCTGTGTTCTATTACTCAACAGGAATCTTCAAGGATGCAGGTGTTCAAGAGC
CCATCTATGCCACCATCGGCGCGGGTGTGGTTAATACTATCTTCACTGTAGTTTCTCTATTTCTGGTGGA
AAGGGCAGGAAGAAGGACTCTGCATATGATAGGCCTTGGAGGGATGGCTTTTTGTTCCACGCTCATGACT
GTTTCTTTGTTATTAAAGGATAACTATAATGGGATGAGCTTTGTCTGTATTGGGGCTATCTTGGTCTTTG
TAGCCTTCTTTGAAATTGGACCAGGCCCCATTCCCTGGTTTATTGTGGCCGAACTCTTCAGCCAGGGCCC
CCGCCCAGCTGCGATGGCAGTGGCCGGCTGCTCCAACTGGACCTCCAACTTCCTAGTCGGATTGCTCTTC
CCCTCCGCTGCTCACTATTTAGGAGCCTACGTTTTTATTATCTTCACCGGCTTCCTCATTACCTTCTTGG
CTTTTACCTTCTTCAAAGTCCCTGAGACCCGTGGCAGGACTTTTGAGGATATCACACGGGCCTTTGAAGG
GCAGGCACACGGTGCAGATAGATCTGGAAAGGACGGCGTCATGGAGATGAACAGCATCGAGCCTGCTAAG
GAGACCACCACCAATGTCTAA

Translation (496 aa):
MGTQKVTPALIFAITVATIGSFQFGYNTGVINAPEKIIKEFINKTLTDKGNAPPSEVLLTSLWSLSVAIF
SVGGMIGSFSVGLFVNRFGRRNSMLIVNLLAVTGGCFMGLCKVAKSVEMLILGRLVIGLFCGLCTGFVPM
YIGEISPTALRGAFGTLNQLGIVVGILVAQIFGLEFILGSEELWPLLLGFTILPAILQSAALPFCPESPR
FLLINRKEEENAKQILQRLWGTQDVSQDIQEMKDESARMSQEKQVTVLELFRVSSYRQPIIISIVLQLSQ
QLSGINAVFYYSTGIFKDAGVQEPIYATIGAGVVNTIFTVVSLFLVERAGRRTLHMIGLGGMAFCSTLMT
VSLLLKDNYNGMSFVCIGAILVFVAFFEIGPGPIPWFIVAELFSQGPRPAAMAVAGCSNWTSNFLVGLLF
PSAAHYLGAYVFIIFTGFLITFLAFTFFKVPETRGRTFEDITRAFEGQAHGADRSGKDGVMEMNSIEPAK
ETTTNV


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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