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Report for CCDS58388.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
58388.1 Public Homo sapiens 15 GOLGA6C 24 110 108 CCDS HistoryNCBI Gene:653641Re-query CCDS DB by CCDS ID:58388.1See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 58388.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000300576.6 ENSP00000300576.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000300576.6Link to Ensembl Protein Viewer:ENSP00000300576.5Re-query CCDS DB by Nucleotide ID:ENST00000300576Re-query CCDS DB by Protein ID:ENSP00000300576
Original member Current member NCBI NM_001164404.2 NP_001157876.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001164404.2Link to Protein Sequence:NP_001157876.1Re-query CCDS DB by Nucleotide ID:NM_001164404Re-query CCDS DB by Protein ID:NP_001157876Link to BLAST:NP_001157876.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001157876.1 693 A6NDK9 693 100% 0 0

Chromosomal Locations for CCDS 58388.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 75258599 75258682 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75260373 75260492 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75262412 75262492 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75263348 75263386 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75263648 75263698 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75263799 75263880 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75263977 75264083 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75265122 75265208 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75265317 75265424 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75265617 75265704 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75266105 75266613 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75266890 75266958 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75268289 75268364 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75268797 75268888 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75269453 75269555 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75269639 75269742 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75269832 75269985 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75270072 75270199 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2082 nt):
ATGTGGCCCCAACCCTACCTCCCTCCCCACCCCATGATGTTAGAAGAATCTCGACAGAATAAATTGGCAG
CAGCCAAGAAAAAGCTAAAAGAATATCAGCAAAGGAAGAGCCCTGGTATTCCAGCAGGAGCAAAGACAAA
AAAGAAAAAAACTGACAGTAGCCCTGAGACAACCACTTCCGGTGGTGGCCACTCACCTGGGGATAGCCAG
TACCAAGAACTAGCAGTAGCCCTGGAGTCAAGCTCAGTGACAATCAATCAGCTCAATGAAAACATAGAAT
CATTGAAACAGCAGAAGAAACAAGTGGAACATCAGCTGGAAGAAGCAAAGAAAACAAACAATGAAATACA
CAAAGCACAAATGGAGCAGTTAGAGACAATCAACATCCTCACATTGGAAAAGGCAGACTTGAAGACCACC
CTTTACCATACTAAACGTGCTGCCCGACACTTCGAAGAAGAGTCCAAGGATCTGGCTGGCCGCCTGCAAT
ACTCCTTACAGCGTATTCAAGAATTGGAGCGGGCTCTCTCTGCTGTGTCTACACAGCAGCAGGAAGAGGA
CAGGTCCTCGAGCTGCAGAGAAGCGGTCCTCCAGCGGCGGTTACAGCAGACCATAAAGGAGCGGGCGCTG
CTGAACGCACACGTGACACAGGTGACAGAGTCACTAAAACAAGTCCAGCTAGAGCGGGACGAATATGCTA
AACACATAAAAGGAGAGAGGGCCCGGTGGCAGGAGAGGATGTGGAAAATGTCGGTGGAGGCTCGAACATT
GAAGGAAGAGAAGAAGCGTGACATACATCGGATACAGGAGCTGGAGAGGAGCTTGTCCGAACTCAAAAAC
CAGATGGCTGAGCCCCCATCCCTGGCACCCCCAGCAGTGACCTCTGTGGTGGAACAGCTACAAGATGAGG
CCAAACACCTGAGGCAGGAGGTGGAAGGTCTGGAGGGAAAGCTCCAGTCCCAGGTGGAAAACAATCAGGC
CTTGAGTCTCCTTAGCAAGGAACAAAAGCAGAGACTCCAGGAGCAGGAGGAGATGCTCCGAGAGCAGGAG
GCGCAGAGAGTGCGGGAGCAGGAGAGACTGTGTGAACAAAACGAGAGGCTTCGGGAGCAGCAGAAGACGC
TACAGGAGCAGGGTGAGAGGCTGCGAAAGCAGGAGCAGAGGCTACGCAAACAGGAGGAGAGGCTGCGAAA
GGAGGAGGAGAGGCTGCAAAAGCAGGAAAAGAGGCTGTGGGACCAGGAGGAGAGGCTGTGGAAGAAGGAG
GAGAGGCTACAAAAGCAGGAGGAGAGGCTCGCGCTCTCCCAGAACCACAAGCTCGACAAGCAGCTGGCCG
AGCCACAGTGCAGCTTCGAGGATCTGAACAACGAGAAAAAGAGCGCACTGCAGTTGGAGCAGCAAGTAAA
GGAGCTGCAGGAGAAGCTAGACGAGGAGCACCTAGAAGCTGCCAGCCAGCGGAACCAACAGCTAGAGACC
CAGCTAAGCCTCGTGGCTCTCCCTGGAGAAGGAGATGGAGGACAACATCTGGACAGTGAGGAGGAGGAGG
CGCCTCGGCCCACGCCAAACATCCCAGAGGACCTGGAGAGCCGGGAGGCCACGAGCAGCTTTATGGACCT
CCCGAAGGAGAAGGCGGACGGGACGGAGCAGGTGGAGAGACGAGAGCTTGGATTCGTCCAGCCTTCTGGA
GTGACAGACGGCATGAGAGAGTCCTTCACCGTATATGAAAGCCAGGGGGCAGTGCCAAACACGCGGCACC
AGGAGATGGAGGATGTCATCAGGCTGGCCCAGAAGGAGGAGGAGATGAAGGTGAAGCTGCTGGAGCTGCA
AGAGTTGGTGTTGCCCCTTGTGGGCAACCATGAGGGGCATGGCAAATTCCTCATCGCTGCCCAGAACCCT
GCTGATGAGCCCACTCCAGGGGCCCCAGCCCCCCAGGAACTTGGGGCTGCCGGTGAGCAGGATGATTTTT
ATGAAGTGAGCCTGGACAACAACGTGGAGCCTGCACCAGGAGCGGCCAGGGAGGGTTCTCCCCATGACAA
CCCCCCGGTACAGCAGATCGTGCAGCTGTCTCCTGTCATGCAGGACACCTAG

Translation (693 aa):
MWPQPYLPPHPMMLEESRQNKLAAAKKKLKEYQQRKSPGIPAGAKTKKKKTDSSPETTTSGGGHSPGDSQ
YQELAVALESSSVTINQLNENIESLKQQKKQVEHQLEEAKKTNNEIHKAQMEQLETINILTLEKADLKTT
LYHTKRAARHFEEESKDLAGRLQYSLQRIQELERALSAVSTQQQEEDRSSSCREAVLQRRLQQTIKERAL
LNAHVTQVTESLKQVQLERDEYAKHIKGERARWQERMWKMSVEARTLKEEKKRDIHRIQELERSLSELKN
QMAEPPSLAPPAVTSVVEQLQDEAKHLRQEVEGLEGKLQSQVENNQALSLLSKEQKQRLQEQEEMLREQE
AQRVREQERLCEQNERLREQQKTLQEQGERLRKQEQRLRKQEERLRKEEERLQKQEKRLWDQEERLWKKE
ERLQKQEERLALSQNHKLDKQLAEPQCSFEDLNNEKKSALQLEQQVKELQEKLDEEHLEAASQRNQQLET
QLSLVALPGEGDGGQHLDSEEEEAPRPTPNIPEDLESREATSSFMDLPKEKADGTEQVERRELGFVQPSG
VTDGMRESFTVYESQGAVPNTRHQEMEDVIRLAQKEEEMKVKLLELQELVLPLVGNHEGHGKFLIAAQNP
ADEPTPGAPAPQELGAAGEQDDFYEVSLDNNVEPAPGAAREGSPHDNPPVQQIVQLSPVMQDT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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