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Report for CCDS36664.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
36664.1 Public Mus musculus 13 Cks2 23 108 98 CCDS HistoryNCBI Gene:66197Re-query CCDS DB by CCDS ID:36664.1See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 36664.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000075853.5 ENSMUSP00000075250.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000075853.5Link to Ensembl Protein Viewer:ENSMUSP00000075250.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000075853Re-query CCDS DB by Protein ID:ENSMUSP00000075250
Original member Current member NCBI NM_025415.3 NP_079691.1 Accepted alive Link to Nucleotide Sequence:NM_025415.3Link to Protein Sequence:NP_079691.1Re-query CCDS DB by Nucleotide ID:NM_025415Re-query CCDS DB by Protein ID:NP_079691Link to BLAST:NP_079691.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_079691.1 79 P56390 79 100% 0 0

Chromosomal Locations for CCDS 36664.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 13 (NC_000079.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 51645413 51645471 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 51649585 51649712 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 51650337 51650389 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (240 nt):
ATGGCCCACAAGCAGATCTACTACTCAGACAAGTACTTCGATGAGCACTACGAGTACCGGCATGTCATGT
TACCCAGAGAACTCTCTAAACAAGTACCCAAAACTCATCTGATGTCCGAAGAGGAGTGGAGGAGACTTGG
TGTCCAACAGAGTCTAGGATGGGTTCATTACATGATTCATGAGCCAGAACCGCATATTCTTCTCTTTAGA
CGACCTCTTCCAAAAGAACAACAAAAATGA

Translation (79 aa):
MAHKQIYYSDKYFDEHYEYRHVMLPRELSKQVPKTHLMSEEEWRRLGVQQSLGWVHYMIHEPEPHILLFR
RPLPKEQQK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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