NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS75993.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
75993.1 Public Homo sapiens X CHIC1 24 110 108 CCDS HistoryNCBI Gene:53344Re-query CCDS DB by CCDS ID:75993.1Re-query CCDS DB by GeneID:53344See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 75993.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000373504.10 ENSP00000362603.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000373504.10Link to Ensembl Protein Viewer:ENSP00000362603.5Re-query CCDS DB by Nucleotide ID:ENST00000373504Re-query CCDS DB by Protein ID:ENSP00000362603
Original member Current member NCBI NM_001300884.1 NP_001287813.1 Accepted alive Link to Nucleotide Sequence:NM_001300884.1Link to Protein Sequence:NP_001287813.1Re-query CCDS DB by Nucleotide ID:NM_001300884Re-query CCDS DB by Protein ID:NP_001287813Link to BLAST:NP_001287813.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001287813.1 204 Q5VXU3-2 204 100% 0 0

Chromosomal Locations for CCDS 75993.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 73563285 73563580 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 73577407 73577461 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 73584417 73584572 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 73679326 73679382 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 73680955 73681005 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (615 nt):
ATGAGCATCCTGCTGCCCAACATGGCGGAGTTCGACACCATCTCGGAACTGGAGGAGGAGGAGGAAGAAG
AAGCGGCAACGTCGTCGTCGTCGCCGTCGTCGTCGTCGTCGGTATCTGGGCCCGACGATGACGAGGAGGA
TGAGGAGGAAGAGGAGGAAGAGGAGGAGGAGGAAGAAGAGGAGGAGGAGGAAGAGGAGGAGGAAGCGCCG
CCCCCGCCTCGGGTAGTGAGCGAGGAGCATCTGCGGAGATATGCTCCCGACCCTGTATTAGTGCGGGGTG
CCGGCCACATCACTGTGTTTGGCTTGAGCAACAAGTTTGATACTGAATTTCCCTCCGTTCTAACAGGGAA
GGTGGCCCCAGAAGAATTTAAAACCAGCATTGGCCGTGTGAATGCATGTTTGAAAAAGGCTCTCCCGGTC
AATGTGAAATGGCTGCTGTGTGGTTGTCTCTGCTGCTGTTGCACACTGGGTTGCAGCCTATGGCCTGTTA
TTTGTCTCAACAAAAGAACCAGAAGATCAATTCAGAAGTTAATAGAATGGGAAAATAACAGATTATATCA
CAAGGTAATACTAATAGAATTCTTACCAAAATATCCCATATTCCGACCTGACTGA

Translation (204 aa):
MSILLPNMAEFDTISELEEEEEEEAATSSSSPSSSSSVSGPDDDEEDEEEEEEEEEEEEEEEEEEEEEAP
PPPRVVSEEHLRRYAPDPVLVRGAGHITVFGLSNKFDTEFPSVLTGKVAPEEFKTSIGRVNACLKKALPV
NVKWLLCGCLCCCCTLGCSLWPVICLNKRTRRSIQKLIEWENNRLYHKVILIEFLPKYPIFRPD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH