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Report for CCDS73350.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
73350.1 Public Homo sapiens 11 EMSY 24 110 108 CCDS HistoryNCBI Gene:56946Re-query CCDS DB by CCDS ID:73350.1Re-query CCDS DB by GeneID:56946See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 73350.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000525038.5 ENSP00000436968.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000525038.5Link to Ensembl Protein Viewer:ENSP00000436968.1Re-query CCDS DB by Nucleotide ID:ENST00000525038Re-query CCDS DB by Protein ID:ENSP00000436968
Original member Current member NCBI NM_001300944.2 NP_001287873.1 Accepted alive Link to Nucleotide Sequence:NM_001300944.2Link to Protein Sequence:NP_001287873.1Re-query CCDS DB by Nucleotide ID:NM_001300944Re-query CCDS DB by Protein ID:NP_001287873Link to BLAST:NP_001287873.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001287873.1 1323 Q7Z589-4 1323 100% 0 0

Chromosomal Locations for CCDS 73350.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 76446939 76447008 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 76451858 76451957 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 76453314 76453388 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 76454749 76454790 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 76458183 76458358 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 76459933 76460085 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 76463821 76464080 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 76472564 76472840 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 76496215 76496469 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 76513386 76513535 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 76516142 76516312 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 76523155 76523291 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 76526462 76526635 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 76528268 76528466 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 76535895 76536059 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 76537795 76537950 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 76542216 76542367 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 76544259 76544822 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 76545797 76546297 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 76549952 76550146 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3972 nt):
ATGCCTGTTGTGTGGCCAACCCTTCTGGATCTCAGCAGGGATGAATGCAAAAGAATTCTTCGAAAATTGG
AATTGGAGGCATATGCTGGAGTTATCAGTGCACTTCGGGCACAGGGGGATCTCACCAAGGAAAAGAAAGA
TCTTCTTGGAGAACTATCAAAAGTTCTTAGCATCTCAACAGAACGCCACCGTGCTGAAGTTCGGAGAGCA
GTAAACGATGAACGGTTAACAACAATTGCACATAAAATGAATTTATCCTTATATTTGGGTGAAAGACCAA
GTTACAGTATGTCTGGACCTAATAGCTCTTCAGAATGGTCCATTGAAGGTCGTCGATTGGTACCACTGAT
GCCCCGGCTCGTTCCCCAAACCGCCTTTACTGTAACAGCTAATGCTGTTGCTAATGCAGCTATCCAGCAT
AATGCATCTCTTCCAGTGCCTGCAGAAACAGGAAGCAAGGAAGTAGTGGTTTGCTATTCCTACACAAGTA
CCACGTCAACCCCAACCTCTACCCCTGTTCCAAGTGGCAGCATAGCAACGGTTAAGTCTCCAAGACCTGC
CAGTCCTGCCTCCAATGTAGTTGTCTTGCCAAGTGGAAGTACTGTTTATGTCAAAAGTGTAAGCTGTTCA
GATGAAGATGAAAAACCCAGAAAACGAAGGCGAACAAACTCTTCCAGCTCCTCTCCTGTTGTTCTAAAGG
AAGTTCCAAAGGCCGTTGTTCCAGTCTCAAAGACGATCACTGTGCCTGTGAGTGGTAGTCCCAAGATGAG
CAACATCATGCAGAGCATTGCCAACTCCTTACCACCCCACATGTCTCCTGTAAAAATAACCTTCACTAAA
CCATCAACACAGACAACAAACACAACAACACAGAAGGTTATTATAGTCACCACATCACCAAGCTCAACCT
TCGTGCCCAACATTCTCTCCAAATCCCATAACTATGCAGCAGTCACTAAGCTTGTACCAACGTCAGTCAT
TGCTTCTACAACCCAGAAGCCACCAGTTGTTATAACTGCTTCACAGTCCTCTCTGGTCAGTAATAGCAGC
AGTGGCAGCAGCAGTTCTACACCATCACCTATTCCTAATACAGTTGCAGTAACAGCTGTGGTGTCCTCTA
CACCATCTGTGGTCATGTCAACAGTAGCACAAGGTGTATCTACATCAGCAATCAAAATGGCATCAACCAG
ACTTCCTTCCCCCAAAAGCTTAGTGAGTGCCCCAACTCAGATTCTTGCACAGTTCCCTAAACAACATCAA
CAGTCTCCTAAGCAGCAGTTATATCAAGTGCAACAGCAGACACAGCAACAAGTGGCCCAGCCTTCTCCAG
TATCTCATCAGCAACAGCCTCAGCAGTCTCCTTTGCCACCTGGTATTAAACCTACCATCCAAATCAAACA
GGAGTCAGGTGTTAAAATCATCACACAACAGGTTCAACCAAGTAAAATCTTACCCAAACCAGTGACAGCA
ACTCTACCCACCAGTAGCAATTCCCCTATTATGGTGGTTAGCAGTAATGGTGCAATTATGACAACTAAAC
TGGTAACCACTCCTACTGGCACACAAGCAACCTATACCCGGCCAACAGTGAGCCCATCCATTGGTCGGAT
GGCTGCAACCCCTGGAGCTGCAACCTATGTGAAAACTACGAGTGGTAGCATCATTACAGTAGTACCCAAA
TCATTAGCTACCTTGGGGGGCAAGATAATTAGCAGTAATATAGTTTCTGGAACGACTACCAAAATCACTA
CAATCCCAATGACTTCCAAGCCCAACGTGATTGTTGTACAAAAGACTACAGGAAAAGGAACGACCATTCA
AGGCCTCCCGGGCAAAAATGTTGTCACAACGTTGCTAAATGCTGGAGGAGAAAAGACTATTCAGACAGTG
CCAACAGGAGCAAAGCCAGCTATCCTTACTGCTACAAGACCCATCACCAAAATGATTGTAACGCAGCCAA
AAGGAATAGGTTCTACAGTTCAACCAGCAGCTAAAATCATCCCAACAAAAATTGTTTATGGGCAGCAAGG
GAAAACGCAGGTTCTTATTAAACCCAAACCAGTGACTTTTCAAGCGACAGTTGTTAGTGAACAAACAAGA
CAGCTAGTAACAGAAACATTACAGCAAGCATCCAGGGTAGCAGAGGCTGGTAATTCATCTATTCAGGAAG
GAAAAGAAGAACCACAGAATTATACAGATAGTAGTTCCTCTTCTACAGAGTCCTCCCAGAGTTCCCAAGA
TTCCCAGCCTGTAGTTCATGTAATTGCTTCCCGGCGTCAGGATTGGTCAGAACATGAGATTGCAATGGAG
ACTAGCCCTACCATAATTTATCAGGATGTATCCAGTGAATCACAATCAGCTACTTCAACAATCAAAGCTC
TGTTAGAACTCCAACAGACAACAGTAAAGGAAAAATTGGAATCTAAACCAAGACAACCCACTATTGACCT
GAGTCAAATGGCAGTGCCTATTCAGATGACCCAGGAAAAGAGACATTCTCCTGAGAGTCCATCAATTGCT
GTGGTAGAGTCAGAACTAGTAGCTGAATACATCACTACTGTCAGCCATCGCTCCCAGCCCCAACAGCCTT
CCCAGCCCCAGCGGACCCTGCTCCAGCATGTGGCTCAGTCACAGACCGCAACACAGACTTCGGTGGTGGT
GAAGTCCATCCCAGCATCTTCCCCTGGAGCAATCACCCACATTATGCAGCAGGCATTAAGCAGTCACACT
GCTTTTACCAAACACAGCGAGGAACTTGGAACTGAGGAGGGCGAGGTTGAAGAGATGGACACTTTAGACC
CTCAGACAGGTCTGTTTTACCGATCTGCCCTGACTCAGTCACAGTCAGCTAAACAGCAGAAACTTAGCCA
GCCCCCGCTGGAACAGACTCAGCTGCAAGTGAAAACTCTGCAGTGCTTCCAGACTAAACAGAAGCAGACC
ATCCACCTGCAGGCAGACCAGCTCCAGCACAAACTCCCGCAAATGCCCCAGCTTTCCATCAGGCATCAAA
AACTCACCCCTCTCCAGCAAGAACAAGCACAGCCCAAGCCAGATGTACAGCACACACAGCATCCCATGGT
GGCCAAAGACAGGCAGCTTCCTACCTTAATGGCACAGCCCCCGCAAACTGTAGTACAGGTGCTTGCAGTG
AAAACCACGCAGCAGCTCCCTAAACTGCAGCAGGCTCCGAACCAACCAAAAATCTACGTGCAACCCCAAA
CCCCCCAGAGCCAAATGTCGCTCCCAGCTTCTTCAGAGAAACAGACGGCAAGCCAGGTGGAGCAGCCAAT
TATAACCCAAGGATCCTCTGTTACAAAGATAACTTTTGAGGGGCGCCAGCCTCCCACAGTTACAAAGATA
ACTGGTGGCAGTTCTGTGCCTAAGCTGACATCACCAGTTACAAGCATATCTCCCATTCAGGCCTCTGAGA
AGACAGCAGTGTCTGACATTTTGAAAATGTCTTTGATGGAAGCTCAGATTGATACAAATGTAGAACATAT
GATAGTGGATCCCCCAAAGAAGGCTCTTGCCACTAGCATGCTCACTGGTGAAGCAGGATCATTACCCTCC
ACCCACATGGTGGTGGCAGGGATGGCGAATTCCACTCCCCAGCAACAGAAATGTAGAGAGTCCTGTTCGA
GTCCATCCACTGTTGGCTCTTCCCTAACGACAAGGAAAATTGATCCACCAGCAGTGCCTGCGACAGGCCA
GTTCATGCGTATTCAGAATGTAGGCCAAAAGAAAGCTGAAGAGAGTCCAGCAGAAATTATCATCCAGGCT
ATTCCTCAGTATGCTATTCCTTGTCACTCCAGCTCCAATGTGGTGGTGGAGCCCAGTGGGCTTCTTGAGC
TAAACAACTTCACTAGTCAACAGCTGGATGATGAGGAGACAGCAATGGAGCAGGACATAGACAGTAGCAC
GGAGGATGGAACTGAACCCAGCCCTTCTCAGAGCTCTGCTGAACGGTCCTAG

Translation (1323 aa):
MPVVWPTLLDLSRDECKRILRKLELEAYAGVISALRAQGDLTKEKKDLLGELSKVLSISTERHRAEVRRA
VNDERLTTIAHKMNLSLYLGERPSYSMSGPNSSSEWSIEGRRLVPLMPRLVPQTAFTVTANAVANAAIQH
NASLPVPAETGSKEVVVCYSYTSTTSTPTSTPVPSGSIATVKSPRPASPASNVVVLPSGSTVYVKSVSCS
DEDEKPRKRRRTNSSSSSPVVLKEVPKAVVPVSKTITVPVSGSPKMSNIMQSIANSLPPHMSPVKITFTK
PSTQTTNTTTQKVIIVTTSPSSTFVPNILSKSHNYAAVTKLVPTSVIASTTQKPPVVITASQSSLVSNSS
SGSSSSTPSPIPNTVAVTAVVSSTPSVVMSTVAQGVSTSAIKMASTRLPSPKSLVSAPTQILAQFPKQHQ
QSPKQQLYQVQQQTQQQVAQPSPVSHQQQPQQSPLPPGIKPTIQIKQESGVKIITQQVQPSKILPKPVTA
TLPTSSNSPIMVVSSNGAIMTTKLVTTPTGTQATYTRPTVSPSIGRMAATPGAATYVKTTSGSIITVVPK
SLATLGGKIISSNIVSGTTTKITTIPMTSKPNVIVVQKTTGKGTTIQGLPGKNVVTTLLNAGGEKTIQTV
PTGAKPAILTATRPITKMIVTQPKGIGSTVQPAAKIIPTKIVYGQQGKTQVLIKPKPVTFQATVVSEQTR
QLVTETLQQASRVAEAGNSSIQEGKEEPQNYTDSSSSSTESSQSSQDSQPVVHVIASRRQDWSEHEIAME
TSPTIIYQDVSSESQSATSTIKALLELQQTTVKEKLESKPRQPTIDLSQMAVPIQMTQEKRHSPESPSIA
VVESELVAEYITTVSHRSQPQQPSQPQRTLLQHVAQSQTATQTSVVVKSIPASSPGAITHIMQQALSSHT
AFTKHSEELGTEEGEVEEMDTLDPQTGLFYRSALTQSQSAKQQKLSQPPLEQTQLQVKTLQCFQTKQKQT
IHLQADQLQHKLPQMPQLSIRHQKLTPLQQEQAQPKPDVQHTQHPMVAKDRQLPTLMAQPPQTVVQVLAV
KTTQQLPKLQQAPNQPKIYVQPQTPQSQMSLPASSEKQTASQVEQPIITQGSSVTKITFEGRQPPTVTKI
TGGSSVPKLTSPVTSISPIQASEKTAVSDILKMSLMEAQIDTNVEHMIVDPPKKALATSMLTGEAGSLPS
THMVVAGMANSTPQQQKCRESCSSPSTVGSSLTTRKIDPPAVPATGQFMRIQNVGQKKAEESPAEIIIQA
IPQYAIPCHSSSNVVVEPSGLLELNNFTSQQLDDEETAMEQDIDSSTEDGTEPSPSQSSAERS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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