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Report for CCDS38961.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
38961.1 Public Mus musculus 4 Zfp991 23 108 98 CCDS HistoryNCBI Gene:666532Re-query CCDS DB by CCDS ID:38961.1See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 38961.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000084149.9 ENSMUSP00000081167.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000084149.9Link to Ensembl Protein Viewer:ENSMUSP00000081167.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000084149Re-query CCDS DB by Protein ID:ENSMUSP00000081167
Original member Current member NCBI NM_001083918.1 NP_001077387.1 Accepted alive Link to Nucleotide Sequence:NM_001083918.1Link to Protein Sequence:NP_001077387.1Re-query CCDS DB by Nucleotide ID:NM_001083918Re-query CCDS DB by Protein ID:NP_001077387Link to BLAST:NP_001077387.1

Chromosomal Locations for CCDS 38961.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 4 (NC_000070.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 147175875 147175904 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 147176747 147176873 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 147178325 147179889 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1722 nt):
ATGAGTGTGTGTCTGGTAAATACACCACAGGGTCTGTTAACCTTCAAGGACGTGGCCTTGGACTTCTCAC
TGGAGGAATGGGAATCTCTCAGTTTTGCTCAGAGGACATTGTACATGGATGTGATGTTGGAGAATTACAA
TAATCTGTTATTTGTGGAAAATCATTGCATATGTGGAAAGTATGAGAAGGTCTTGGATCAAGACAGCCAG
TACATTGTCCATGAACACATGAATATTCAAGAGAAGTCTTCTAAATGGGACAAACTTAGCAATGTGATAC
TTGAAGCCCCCCAATGTACACCTTACAAAACTAATCACACCTCTGATGCTCTTCAATTTTCGAACCAAAA
AAGACTTAAGCCCAGGAACACTAAAGAAGTTTGCAAATACAATGACTCTGTAAACAGTTTAACTTTGTTT
TCTACCATTAGTCTCAATCAGGGAATCCACATGCAGAAGAAAAAACACAACGGAAATGCAGAATCTGAGA
AGGCTTTTATTTCTAAACATAAAGTCATGGTGAAACGAAATAATACTGGAGTGAACCCTTACAAATGTAG
TAAATTTGACAAATATCTTACCCAGAGAGACAAACTTCAAAGTCAGCAGAGAATTTATCATGAAAAGAAA
CATTACAGAAGTAGTAAAAGTGACAAATGCTTTACCCATCAGATCGATCTTAGTATCCATCAGGGAATTC
ATGCAGAAGAGAAAATTTATAAATGTAGTGAATGTGACAAATGCTTTACCCACAAATTTCATCTTAATAT
TCATCAGAGAATTCATACAGGAGAGAAACCTTACAAATGTAGTGAATGTGACAAATGCTTTACCCAAAAA
TCTCATCTTAATATTCATCAGAGAATTCATACAGGAGAGAAACCTTACAAATGCATTGTATGTGAGAAAT
GCTTTACTGAAAAAGGCAATCTGAGAATTCATCAGAGGATTCATACAGGAGATAAACCTTACAAATGCAG
TGAATGTGACAAATGCTTTACCCAAAAATCCCATCTTAATATTCATCAGAGAATTCATACAGGAGAGAAA
CCTTACAAATGTAGTCAATGTGACAAATCCTTTACTGAAAATGGCCATCTGAGAATTCATCAGAGAAATC
ATACAGGTGAGAAACCTTACAAATGTAGTCGATGTGACAAATCCTTTACTGAAAATGGCCATCTGAGAAT
TCATCAGAGAATTCATACAGGAGAGAAACCTTACAAATGCAGTGAATGTGACAAATGCTTTACTAAAAAA
TTCAGTTTGAGGATTCATCAGAGAATTCATACAGGAGAGAAACCTTACAAATGCAGTGAATGTGACAAAT
GCTTTACTTTCAAAGGCAGTCTGAGGATTCATCAGAGAATTCATACAGGAGAGAAACCCTACAAATGTAG
TGAATGTGACAAATCCTTTACTGAAAATGGCTGTTTGAGAATTCATCAGAGAATTCATACAGGAGAGAAA
CCTTACAAATGCACTGAATGTGACAAATGCTTTACTTTCAAAGGCAGTCTGAGGATTCATCAGAGAATTC
ATACAGGAGAGAAACCTTACAAATGCACTGAATGTGACAAATCCTTTACTGAAAAGGGCAAACTGAGAAT
TCATCAGAGAATTCATAAAGGAGAGAAACCTTACAAATGTAGTGAATGTGACAAATGCTTTACTGAAAAA
GGCCATCAGAGAATTCATACAGGAGAGATAGCTTACAAATAG

Translation (573 aa):
MSVCLVNTPQGLLTFKDVALDFSLEEWESLSFAQRTLYMDVMLENYNNLLFVENHCICGKYEKVLDQDSQ
YIVHEHMNIQEKSSKWDKLSNVILEAPQCTPYKTNHTSDALQFSNQKRLKPRNTKEVCKYNDSVNSLTLF
STISLNQGIHMQKKKHNGNAESEKAFISKHKVMVKRNNTGVNPYKCSKFDKYLTQRDKLQSQQRIYHEKK
HYRSSKSDKCFTHQIDLSIHQGIHAEEKIYKCSECDKCFTHKFHLNIHQRIHTGEKPYKCSECDKCFTQK
SHLNIHQRIHTGEKPYKCIVCEKCFTEKGNLRIHQRIHTGDKPYKCSECDKCFTQKSHLNIHQRIHTGEK
PYKCSQCDKSFTENGHLRIHQRNHTGEKPYKCSRCDKSFTENGHLRIHQRIHTGEKPYKCSECDKCFTKK
FSLRIHQRIHTGEKPYKCSECDKCFTFKGSLRIHQRIHTGEKPYKCSECDKSFTENGCLRIHQRIHTGEK
PYKCTECDKCFTFKGSLRIHQRIHTGEKPYKCTECDKSFTEKGKLRIHQRIHKGEKPYKCSECDKCFTEK
GHQRIHTGEIAYK


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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