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Report for CCDS26096.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26096.1 Public Mus musculus 12 Gpr65 23 108 98 CCDS HistoryNCBI Gene:14744Re-query CCDS DB by CCDS ID:26096.1Re-query CCDS DB by GeneID:14744See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 26096.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000075072.5 ENSMUSP00000074581.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000075072.5Link to Ensembl Protein Viewer:ENSMUSP00000074581.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000075072Re-query CCDS DB by Protein ID:ENSMUSP00000074581
Original member Current member NCBI NM_008152.3 NP_032178.1 Accepted alive Link to Nucleotide Sequence:NM_008152.3Link to Protein Sequence:NP_032178.1Re-query CCDS DB by Nucleotide ID:NM_008152Re-query CCDS DB by Protein ID:NP_032178Link to BLAST:NP_032178.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_032178.1 337 Q61038 337 99.4065% 0 2

Chromosomal Locations for CCDS 26096.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 12 (NC_000078.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 98275090 98276103 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1014 nt):
ATGGCGATGAACAGCATGTGCATTGAAGAGCAGCGCCACCTCGAACACTATTTGTTCCCGGTGGTCTACA
TAATTGTGTTTATAGTCAGCGTCCCAGCCAACATCGGATCTTTATGCGTATCCTTTCTGCAAGCGAAGAA
GGAAAATGAGCTAGGGATTTACCTCTTCAGTCTGTCCCTGTCAGACCTGCTGTATGCGCTGACTCTGCCC
CTCTGGATCAATTACACTTGGAATAAAGACAACTGGACTTTCTCTCCCACCTTGTGCAAAGGAAGCGTTT
TCTTCACCTACATGAACTTTTACAGCAGCACGGCGTTCCTCACTTGCATTGCCCTGGACCGCTATTTAGC
AGTCGTCTACCCTCTGAAGTTTTCCTTCCTAAGAACGAGAAGATTCGCGTTTATTACCAGCCTCTCCATC
TGGATATTAGAGTCCTTCTTTAACTCTATGCTTCTGTGGAAAGATGAAACGAGTGTTGAATATTGTGACT
CGGACAAATCTAATTTCACTCTCTGCTATGACAAATACCCTCTGGAGAAATGGCAGATAAACCTCAACCT
GTTTCGGACGTGCATGGGCTACGCAATACCCTTGATCACCATCATGATCTGCAACCATAAAGTCTACCGA
GCTGTGCGGCACAACCAAGCCACGGAAAACAGCGAGAAGAGAAGGATCATAAAGTTGCTTGCTAGCATCA
CGTTGACTTTCGTCCTATGCTTTACCCCCTTCCACGTGATGGTGCTCATCCGCTGCGTTTTAGAGCGCGA
CATGAACGTCAATGACAAGTCTGGATGGCAGACGTTTACGGTGTACAGAGTCACAGTAGCCCTGACGAGT
CTAAACTGTGTTGCCGATCCCATTCTGTACTGCTTTGTGACTGAGACGGGGAGAGCTGATATGTGGAACA
TATTAAAATTGTGTACTAGGAAACACAATAGACACCAAGGGAAAAAAAGGGACATACTTTCTGTGTCCAC
AAGAGATGCTGTAGAATTAGAGATTATAGACTAA

Translation (337 aa):
MAMNSMCIEEQRHLEHYLFPVVYIIVFIVSVPANIGSLCVSFLQAKKENELGIYLFSLSLSDLLYALTLP
LWINYTWNKDNWTFSPTLCKGSVFFTYMNFYSSTAFLTCIALDRYLAVVYPLKFSFLRTRRFAFITSLSI
WILESFFNSMLLWKDETSVEYCDSDKSNFTLCYDKYPLEKWQINLNLFRTCMGYAIPLITIMICNHKVYR
AVRHNQATENSEKRRIIKLLASITLTFVLCFTPFHVMVLIRCVLERDMNVNDKSGWQTFTVYRVTVALTS
LNCVADPILYCFVTETGRADMWNILKLCTRKHNRHQGKKRDILSVSTRDAVELEIID


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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