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Report for CCDS20865.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
20865.1 Public Mus musculus 7 Ceacam11 23 108 98 CCDS HistoryNCBI Gene:66996Re-query CCDS DB by CCDS ID:20865.1See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 20865.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000094799.2 ENSMUSP00000092393.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000094799.2Link to Ensembl Protein Viewer:ENSMUSP00000092393.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000094799Re-query CCDS DB by Protein ID:ENSMUSP00000092393
Original member Current member NCBI NM_023289.2 NP_075778.2 Accepted alive Link to Nucleotide Sequence:NM_023289.2Link to Protein Sequence:NP_075778.2Re-query CCDS DB by Nucleotide ID:NM_023289Re-query CCDS DB by Protein ID:NP_075778Link to BLAST:NP_075778.2

Chromosomal Locations for CCDS 20865.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 17972249 17972312 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 17973357 17973716 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 17975303 17975662 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 17978412 17978539 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (912 nt):
ATGATGGACTCTCTTGCACTTTCCTGCAAAGACTCTACCTCCTGGCAGGGGATCCTGCTCACAGTCTCCC
TTTTAACCTGCTGGCTGATTCCAACTACCACCCAGATCACCATTGAATCAGTGCCTCCCATTGCTGTTGA
AGGGGAAAATGTTCTTCTGTTTGTGCATAACTTGCCAGAGAATGTTCAAACCCTTTCCTGGTACACAGGA
GTTAAACCACTCAAGAATTGTGAAATTGCAAGTCATGTGACAGCTACCAATTCTACTGTGGTGGGACCTG
CACACAGTGGTAGAGAGATTGTACTCAAAAATGGATCTCTGCTGATCAAGAGTACCACCAGAAAAGACTC
AGGTTATTACACTCTACAAATACTTGATACAACCTCAAGACCTGAATTAATACGTGCAGAATTCTTTGTT
CACAGCCCACTTTTAGGCTACAAGAAGCATCTTGCCCCTTCTCAACTCACAATTAAGTTGGTGCCATCTA
GGGTTGAAGAAAATGACAATATTCTCCTGCAGGTTTATCATCTGCCACAGAAGCTTCAAGGCTTTGCCTG
GCACAAAGGAGTACTTCCACTTGACCATTTTAAGATAGCAAGCCATTCATTCCTCACCCATTCAACTATG
CTGGGGAGTGCATATCAAGACAGAGTGATAATATGTAATGATGGAACCCTGGTGCTCTTGAATGTCACTC
AGAATGACACAGGGCTTTACACCTTCCGAACCATATCTGTGGATTTGAAATCAGAATGGGACATTTTGGA
CCTCCAAGTAAATAAACCTGGAAATTGGGCTTCACCCAATCTCAGACCAACAAGTAAACCATGGACTTTC
TCGAAGAGTCGAAGACGAGCGGCAGACATGTGCGATTCTTCCATTACTTCCGTTACTATTCAAAATAAAT
AA

Translation (303 aa):
MMDSLALSCKDSTSWQGILLTVSLLTCWLIPTTTQITIESVPPIAVEGENVLLFVHNLPENVQTLSWYTG
VKPLKNCEIASHVTATNSTVVGPAHSGREIVLKNGSLLIKSTTRKDSGYYTLQILDTTSRPELIRAEFFV
HSPLLGYKKHLAPSQLTIKLVPSRVEENDNILLQVYHLPQKLQGFAWHKGVLPLDHFKIASHSFLTHSTM
LGSAYQDRVIICNDGTLVLLNVTQNDTGLYTFRTISVDLKSEWDILDLQVNKPGNWASPNLRPTSKPWTF
SKSRRRAADMCDSSITSVTIQNK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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