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Report for CCDS22201.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22201.1 Public Mus musculus 8 Bag4 23 108 98 CCDS HistoryNCBI Gene:67384Re-query CCDS DB by CCDS ID:22201.1See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 22201.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000038498.9 ENSMUSP00000044725.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000038498.9Link to Ensembl Protein Viewer:ENSMUSP00000044725.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000038498Re-query CCDS DB by Protein ID:ENSMUSP00000044725
Original member Current member NCBI NM_026121.3 NP_080397.1 Accepted alive Link to Nucleotide Sequence:NM_026121.3Link to Protein Sequence:NP_080397.1Re-query CCDS DB by Nucleotide ID:NM_026121Re-query CCDS DB by Protein ID:NP_080397Link to BLAST:NP_080397.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_080397.1 457 Q8CI61 457 100% 0 0

Chromosomal Locations for CCDS 22201.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 25767924 25768409 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 25769282 25769536 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 25771079 25771333 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 25777423 25777527 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 25784899 25785171 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1374 nt):
ATGTCGGCCCTGAGGCGCTCGGGCTACGGCCCCAGTGACGGCCCTTCTTACGGCCGCTACTACGGGCCCG
GGGGAGGCGATGTCCCGGTGCACGTACCTCCGCCCTTATACCCCCCTCTTCGTCCGGAGCCTCCCCAGCC
TCCGGTTTCCTGGCGAGGGCGCGGGGGCGCCCCGGCCGAGACCACCTGGCCGGGCGAAGGCGCAGGTGGC
GATGGCTACTACCCCTCGGGAGGCGCCTGGGCAGAAGCGAGCAGAGCCGGGGGAGGCCACCAGGAACAGC
CACCATATCCTGGCTATAACTCCAACTACTGGAATTCTGTGCGACCCAGGGCTCCATACCCAGGCTCCTA
CTCTGTGAGGCCAGAGTTACAAGGCCAGAGCCTGAATTCTTATGCAAATGGAGCATATGGACCGCCTTAC
CCTCCTGGCCCTGGAGCAAGTACTGCCTCCTACTCTGGGGCTTACTATGTACCTGGCTATACACAGAGCA
ATTACTCCACGGAAGTTCCAAACACCTACCGTTCACCTGGTAACAGCCCAACTCCAATGTCTCGTTGGAT
GTATTCCCAGCAGGACTGTCCAACAGAAGCACCTCCTCTGAGGGGACAGGTGCCAGGATATCCTGCTTCA
CAGAACCCTGGAATGACCTTGCCCCATTATCCTTATGGAGATGGCAACCGCGCTGTGCCGCAGTCAGGAG
GGACTGGACGACCACAAGACGATGCCTGGGCTTCCAGCGCTTATGGGATGGGAGCCCGTTACCCCTGGCC
TTCAGCTGCACCCTCAGCCCCCTCGGCTGGGAGCCTGTACATGACGGAAAGTGCTTCACCGTGGCCAGGC
AACAGTTCTCCTCAGCCGCCTCCTTCACCCCCACCTCAGCAGCCTAAGGACCCCTCGTACTCCTACAACC
CATCGGGTCAAGGCCTGAGCCGGCACAGCTTTCCCTGCAGCGTCCATCAGTATGAATCTCCGGGAGCAGT
GAACAATGACAACTCAGACCTTTTGGATTCTCAAGTCCAGTATAGTGCTGAGCCTCAGTTATATGGTAAT
GCCAGCAGCGAGCATCCCAGCAACCAAGTTCCGAGTAATAATCTCCCAGAAGAGTGTTTCTCTTCAGATG
AGGGCACTCCTCCAAGTATTAAAAAGATCATACATGTGCTGGAGAAGGTGCAGTTTCTTGAGCAAGAAGT
AGAAGAGTTTGTAGGAAAAAAGACAGACAAAGCGTATTGGCTTCTGGAAGAAATGCTGACAAAGGAACTT
TTAGAACTGGATTCTGTTGAAACTGGGGGCCAGGACTCTGTCCGTCAGGCCAGGAAAGAAGCTGTTTGTA
AGATCCAGGCCATACTGGAAAAATTAGAAAAAAAGGGACTATGA

Translation (457 aa):
MSALRRSGYGPSDGPSYGRYYGPGGGDVPVHVPPPLYPPLRPEPPQPPVSWRGRGGAPAETTWPGEGAGG
DGYYPSGGAWAEASRAGGGHQEQPPYPGYNSNYWNSVRPRAPYPGSYSVRPELQGQSLNSYANGAYGPPY
PPGPGASTASYSGAYYVPGYTQSNYSTEVPNTYRSPGNSPTPMSRWMYSQQDCPTEAPPLRGQVPGYPAS
QNPGMTLPHYPYGDGNRAVPQSGGTGRPQDDAWASSAYGMGARYPWPSAAPSAPSAGSLYMTESASPWPG
NSSPQPPPSPPPQQPKDPSYSYNPSGQGLSRHSFPCSVHQYESPGAVNNDNSDLLDSQVQYSAEPQLYGN
ASSEHPSNQVPSNNLPEECFSSDEGTPPSIKKIIHVLEKVQFLEQEVEEFVGKKTDKAYWLLEEMLTKEL
LELDSVETGGQDSVRQARKEAVCKIQAILEKLEKKGL


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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