NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS18709.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
18709.1 Public Mus musculus 4 Fabp3 23 108 98 CCDS HistoryNCBI Gene:14077Re-query CCDS DB by CCDS ID:18709.1Re-query CCDS DB by GeneID:14077See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 18709.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000070532.7 ENSMUSP00000070709.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000070532.7Link to Ensembl Protein Viewer:ENSMUSP00000070709.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000070532Re-query CCDS DB by Protein ID:ENSMUSP00000070709
Original member Current member NCBI NM_010174.2 NP_034304.1 Accepted alive Link to Nucleotide Sequence:NM_010174.2Link to Protein Sequence:NP_034304.1Re-query CCDS DB by Nucleotide ID:NM_010174Re-query CCDS DB by Protein ID:NP_034304Link to BLAST:NP_034304.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_034304.1 133 P11404 133 100% 0 0

Chromosomal Locations for CCDS 18709.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 4 (NC_000070.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 130308778 130308850 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 130312291 130312463 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 130313954 130314055 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 130315172 130315225 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (402 nt):
ATGGCGGACGCCTTTGTCGGTACCTGGAAGCTAGTGGACAGCAAGAATTTTGATGACTACATGAAGTCAC
TCGGTGTGGGCTTTGCCACCAGGCAGGTGGCTAGCATGACCAAGCCTACTACCATCATCGAGAAGAACGG
GGATACTATCACCATAAAGACACAAAGTACCTTCAAGAACACAGAGATCAACTTTCAGCTGGGAATAGAG
TTCGACGAGGTGACAGCAGATGACCGGAAGGTCAAGTCACTGGTGACGCTGGACGGAGGCAAACTCATCC
ATGTGCAGAAGTGGAACGGGCAGGAGACAACACTAACTAGGGAGCTAGTTGACGGGAAACTCATCCTGAC
TCTCACTCATGGCAGTGTGGTGAGCACTCGGACTTATGAGAAGGAGGCGTGA

Translation (133 aa):
MADAFVGTWKLVDSKNFDDYMKSLGVGFATRQVASMTKPTTIIEKNGDTITIKTQSTFKNTEINFQLGIE
FDEVTADDRKVKSLVTLDGGKLIHVQKWNGQETTLTRELVDGKLILTLTHGSVVSTRTYEKEA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH