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Report for CCDS24062.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
24062.1 Public Mus musculus 10 Tle5 23 108 98 CCDS HistoryNCBI Gene:14797Re-query CCDS DB by CCDS ID:24062.1Re-query CCDS DB by GeneID:14797See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 24062.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000002518.8 ENSMUSP00000002518.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000002518.8Link to Ensembl Protein Viewer:ENSMUSP00000002518.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000002518Re-query CCDS DB by Protein ID:ENSMUSP00000002518
Original member Current member NCBI NM_010347.4 NP_034477.1 Accepted alive Link to Nucleotide Sequence:NM_010347.4Link to Protein Sequence:NP_034477.1Re-query CCDS DB by Nucleotide ID:NM_010347Re-query CCDS DB by Protein ID:NP_034477Link to BLAST:NP_034477.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_034477.1 197 P63002 197 100% 0 0

Chromosomal Locations for CCDS 24062.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 81559642 81559668 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 81561219 81561316 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 81564095 81564158 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 81564673 81564717 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 81564848 81564910 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 81565292 81565366 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 81565472 81565693 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (594 nt):
ATGATGTTTCCGCAAAGCCGGCACTCGGGCTCCTCCCACCTCCCTCAGCAGCTCAAGTTCACCACCTCCG
ACTCCTGTGACCGCATCAAAGATGAGTTCCAGCTGCTGCAAGCGCAGTATCACAGCCTGAAGCTGGAGTG
CGACAAGCTGGCCAGCGAGAAGTCAGAGATGCAGAGGCATTACGTCATGTACTATGAGATGTCCTACGGA
TTGAACATCGAGATGCACAAACAGGCGGAAATTGTGAAGAGGCTGAATGGGATTTGCGCCCAGGTTCTGC
CCTATTTGTCACAGGAGCATCAGCAGCAGGTCCTGGGAGCCATCGAGAGAGCCAAGCAGGTCACGGCTCC
TGAGCTGAACTCCATCATCCGACAGCAGCTCCAGGCTCACCAGCTGTCCCAGCTGCAGGCGCTGGCCCTG
CCCCTGACACCGCTGCCTGTCGGGCTCCAGCCACCGTCCCTCCCTGCAGTCAGTGCAGGCACAGGCCTGC
TGTCACTCTCTGCTCTGGGTTCTCAGACCCACCTCTCCAAGGAGGACAAGAACGGACACGATGGGGACAC
CCACCAGGAGGATGACGGAGAGAAGTCGGATTAG

Translation (197 aa):
MMFPQSRHSGSSHLPQQLKFTTSDSCDRIKDEFQLLQAQYHSLKLECDKLASEKSEMQRHYVMYYEMSYG
LNIEMHKQAEIVKRLNGICAQVLPYLSQEHQQQVLGAIERAKQVTAPELNSIIRQQLQAHQLSQLQALAL
PLTPLPVGLQPPSLPAVSAGTGLLSLSALGSQTHLSKEDKNGHDGDTHQEDDGEKSD


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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