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Report for CCDS36815.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
36815.1 Public Mus musculus 14 Nudt13 23 108 98 CCDS HistoryNCBI Gene:67725Re-query CCDS DB by CCDS ID:36815.1See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 36815.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000022343.5 ENSMUSP00000022343.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000022343.5Link to Ensembl Protein Viewer:ENSMUSP00000022343.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000022343Re-query CCDS DB by Protein ID:ENSMUSP00000022343
Original member Current member EBI ENSMUST00000223663.1 ENSMUSP00000153558.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000223663.1Link to Ensembl Protein Viewer:ENSMUSP00000153558.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000223663Re-query CCDS DB by Protein ID:ENSMUSP00000153558
Original member Current member NCBI NM_026341.3 NP_080617.2 Accepted alive Link to Nucleotide Sequence:NM_026341.3Link to Protein Sequence:NP_080617.2Re-query CCDS DB by Nucleotide ID:NM_026341Re-query CCDS DB by Protein ID:NP_080617Link to BLAST:NP_080617.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_080617.2 352 Q8JZU0 352 100% 0 0

Chromosomal Locations for CCDS 36815.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 20300597 20300679 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 20303953 20304092 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 20306232 20306366 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 20307693 20307799 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 20309672 20309797 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 20310622 20310733 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 20311471 20311625 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 20316024 20316224 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1059 nt):
ATGTCTCTGTATTGTAGAACATTTTTCAGGAGGAAATCTTTTGGGTGCTATAGGCTGCTGTCAACCTATG
TCACTAAGGCACGATACTTATTTGAATTGAAGGAAGATGAAGAGGCCTGCAGGAAGGCTCAGAAGACAGG
AGTGTTTTACCTCTTTCATGACCTGGATCCTTTGCTCCAGGCGTCAGGACATCGATACCTGGTGCCCCGG
CTTAGCCGAGCAGAGTTGGAAGGGCTGCTGGGTAAGTTCGGACAGGATTCGCAAAGAATTGAAGATTCGG
TGCTGGTTGGGTGCTCCGAGCAGCAGGAAGCATGGTTTGCTTTGGATCTAGGTCTGAAGAGTGCCTCCTC
CAGCCGTGCCTCCTTGCCGAAATCTGAAATGGAAGCAGAGCTGGGAGGTTCTTTCATCAAGCTGAGGCAG
GCTCTTTTCCAGCTGAACTCGGTGGACTCCTCCTTGCTGTTCACGGCTCAGGCTCTTCTCCGCTGGCATG
ACGGTCATCAGTTCTGCAGCAAAAGTGGGCAGCCCACCCAGAAGAACGTGGCGGGCAGCAAGCGAGTGTG
TCCCTCCAGTAAAATCATCTATTATCCACAGATGGCGCCCGTAGTGATCACACTGGTGTCAGATGGGGCC
CGCTGCCTACTTGCCCGCCAGAGTTCCTTTCCCAAGGGGTTATATTCTGCCCTGGCAGGTTTCTGTGACA
TAGGTGAAAGTGTGGAAGAAACTGTCCATCGAGAAGTTGCGGAAGAGGTGGGCCTGGAAGTGGAAAACAT
ACAGTACTCTGCGTCCCAGCACTGGCCCTTTCCCAATAGCTCACTCATGATCGCTTGTCACGCAACCGTG
AAACCAGGACACACAGAGATTCAGGTGAACTTGAAGGAACTAGAGGCAGCCGCCTGGTTCAGTCTTGATG
AGGTGACCACAGCCCTGAGGAGAAAGGGCTCCTTGGCTCTGCAGCCGAGTGAGGCTTCCCCACTGTTGCT
GCCTCCCAAGTTAGCCATTGCCCACCACTTGATTAAGAAGTGGGTGGAGACGCGGAGCTGTTCTTCCCTG
GCTGCTTAG

Translation (352 aa):
MSLYCRTFFRRKSFGCYRLLSTYVTKARYLFELKEDEEACRKAQKTGVFYLFHDLDPLLQASGHRYLVPR
LSRAELEGLLGKFGQDSQRIEDSVLVGCSEQQEAWFALDLGLKSASSSRASLPKSEMEAELGGSFIKLRQ
ALFQLNSVDSSLLFTAQALLRWHDGHQFCSKSGQPTQKNVAGSKRVCPSSKIIYYPQMAPVVITLVSDGA
RCLLARQSSFPKGLYSALAGFCDIGESVEETVHREVAEEVGLEVENIQYSASQHWPFPNSSLMIACHATV
KPGHTEIQVNLKELEAAAWFSLDEVTTALRRKGSLALQPSEASPLLLPPKLAIAHHLIKKWVETRSCSSL
AA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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