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Report for CCDS51303.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
51303.1 Public Mus musculus 4 Zmym4 23 108 98 CCDS HistoryNCBI Gene:67785Re-query CCDS DB by CCDS ID:51303.1See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 51303.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000106108.8 ENSMUSP00000101714.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000106108.8Link to Ensembl Protein Viewer:ENSMUSP00000101714.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000106108Re-query CCDS DB by Protein ID:ENSMUSP00000101714
Original member NCBI NM_001114399.1 NP_001107871.1 Updated not alive Link to Nucleotide Sequence:NM_001114399.1Link to Protein Sequence:NP_001107871.1Re-query CCDS DB by Nucleotide ID:NM_001114399Re-query CCDS DB by Protein ID:NP_001107871
Current member NCBI NM_001114399.2 NP_001107871.1 Accepted alive Link to Nucleotide Sequence:NM_001114399.2Link to Protein Sequence:NP_001107871.1Re-query CCDS DB by Nucleotide ID:NM_001114399Re-query CCDS DB by Protein ID:NP_001107871Link to BLAST:NP_001107871.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001107871.1 1549 A2A791-1 1549 100% 0 0

Chromosomal Locations for CCDS 51303.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 4 (NC_000070.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 126864110 126864317 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 126865497 126865626 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 126868717 126868965 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 126870183 126870294 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 126877629 126877780 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 126882215 126882310 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 126882440 126882611 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 126889515 126889609 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 126889996 126890175 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 126891015 126891068 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 126893295 126893466 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 126895280 126895395 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 126898296 126898440 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 126899932 126899969 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 126900605 126900748 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 126902543 126902693 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 126904397 126904569 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 126905279 126905429 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 126905872 126906147 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 126906521 126906636 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 126907086 126907236 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 126910790 126911002 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 126911110 126911284 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 126915072 126915327 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 126915581 126915665 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 126923064 126923234 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 126923569 126923630 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 126925502 126926023 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 126948434 126948479 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 126967816 126967854 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4650 nt):
ATGGCGGAGCGGGAGGTGGAGACCGGCCCCCGAAAGAGGTTTGAACAGAAAAGTGATGCAGTTTTTGATG
AAATTGTAGAAAACTGTGGTGTCATGGATACAGAAATGTCTGAAGATACAGACCACAACTTAACTCCCAC
CCTTGCCAGCATGTCTTATGGAATGCCGAATCAAACAGGATCTGAAAATTCATTGCTGGATGAAGATGAT
TATTTTTTGAACTCTGGGGATCTTGCAGGAATTCCAGTCGTTAGTAGTGACAATGAGGATGAACAGGATT
GTAGTTCAAAGGACAACCTTGTTTCTTCAGTTCACACTGATGGTAGTTTGGAAGTAGAGAGAAGAGCTGC
TCATCAGGAATCAGACAATGAAAATGAAATACAAATTCAAAATCAGTTAAAAAAAGACTTTCCTAAACAG
TTTGATCAGGTTTCTGTCTTTAAATCAATACGAAAAGATTTTTGTTTAGTGAGAGAAAACAGCAAAGAGA
CATTTTCTGGAAAGGAGAAAAATAGAGACCTAACTTATCATGAACGTGAAAAACGGTTGGATAAACCCCA
TAAAGGTTTGGATTCAAGGTTGAAAAGCAGTTTTTTTGATAAAGCAGCTAATCAAGTTGAAGAAACATTA
CATACTCATTTACCACAAAACCCAGAAACAAACTTTAGGGACTCCAGCTACCCATTTGCCAGTAAAGAAT
CCATTGGTTCGGAACTGGGGAATTCGTTTGCATCAAATATTAGAATTAAAGAAGAACCTTTGGATGATGA
GTATGACAGAGCAGTGGCGCCTCAGCAGGGACTACTAGACAGAGTTAAAGACGAACCTGACAATGCTCAA
GAGTATAGTCATGGCCAACAGCAAAAAACTCAAGAGGGGGAACTGAAAATTAGTGCTGTGTTTTCAGTCA
GTGGCAGTCCTCTTGCTCCACAGTTGACTACTGGCTTTCAGCCTTCTCTGGCATCACCTGGCATGAATAA
AATGCTTCCTTCAGTTCCAGCCACAGCTGTTCGAGTTTCTTGCTCTGGTTGTAAAAAAATCCTCCAGAAG
GGGCAGACTGCTTATCAGAGGAAAGGGTCTACTCAGCTTTTCTGCTCTACCCTGTGCCTCACGGGATACA
CAGTTCCACCTGCCCGCCCACCGCCTCCCCTCACCAAGAAGACTTGTTCAAGTTGCTCAAAAGACATTTT
AAATCCAAAGGATGTGATCAGTGCCCAGTTTGAAAATAGTACCACCAGTAAGGATTTTTGCAGTCAATCA
TGCTTGTCAACATATGAACTGAAAAAAAAGCCCATTGTTACCATAAACACAAATAGCATTTCAACCAAAT
GCAGCATGTGCCAGAAGAACGCTGTCATTCGACATGAAGTTAATTACCAGAACGTGGTTCATAAGCTCTG
CAGTGATGCCTGTTTTTCGAAGTTTCGCTCTGCTAACAACCTCACTATGAACTGTTGTGAGAACTGTGGG
GGTTACTGTTATAGTGGCTCTGGACAGTGCCATGTGCTGCAAATTGAGGGGCAGTCTAAGAAGTTTTGTA
GTTCAATGTGTGTCACCTCATACAAGCAGAAATCAGCCAAAATAACACCATGTGCGCTTTGCAAATCATT
GAGATCCTCAGCAGAAATGATTGAGAATACCAATAGCTTGGGGAAGACAGAACTTTTCTGTTCTGTTAAT
TGCTTATCTGCTTACAGAGTTAAAATGGTTACTTCCGCAGGTGTACAAGTTCAGTGTAACAGTTGTAAAA
CCTCAGCAATCCCTCAGTATCATCTAGCCATGTCAGATGGAAGTATACGCAACTTCTGCAGCTACAGTTG
TGTGGTAGCTTTCCAGAATTTGTTTAACAAACCAACTGGAATGAATTCTTCAGTAGTGCCCTTGTCTCAG
GGCCAGGTAATCGTGAGCATCCCCACAGGTTCATCAGCATCTGCAGGTGGAGGGAGTACACCCGCTGTGT
CCCCCACCTCGATCAACAGCTCCGCTGCTGCTGGGCTCCAGAGGTTGGCTGCCCAGTCCCAGCATGTTGG
GTTTGCCCGAAGTGTGGTGAAGCTTAGGTGTCAACATTGTAACCGTCTTTTTGCCACAAAGCCAGAGCTT
CTTGACTACAAGGGTAAAATGTTTCAGTTCTGTGGCAAGAATTGTTGTGATGAATATAAGAAAATCAATA
ATGTAATGGCAATGTGTGAATACTGTAAAATTGAGAAAATTATAAAGGAGACTGTGAGGTTCTCAGGTGC
TGACAAGTCATTTTGTAGTGAAGGTTGCAAATTGCTTTATAAACATGACTTGGGAAAACGCTGGGGAAGT
CATTGTAAAATGTGCAGTTATTGTTTACAGACATCTCCCAAACTGATACAGAATAATTTGGGTGGAAAGG
TGGAAGACTTCTGTTGTGAAGAATGCATGTCTAAGTATACAGTTTTGTTTTATCAGATGGCCAAATGTGA
TGGTTGCAAGAGACAGGGTAAACTCAGTGAATCATTGAAATGGCGAGGTGACATAAAACACTTTTGTAAC
CTGCTTTGCATCTTGATGTTCTGTCATCAGCAAACTGTATGTGACCCACCTTTACAAAACAATGCAGTAG
CAAGTATTTCCATGGTTCAAGCTGCTTCTGCAGGGCCTCCGTCCCTCAGAAAAGATTCAACTCCAGTCAT
TGCTAATGTGGTATCTTTAGCAAGTGCTCCTGCTGCCCAGCCCACAGCAAACACCAACAGCGTCTTACAA
GGTGCAGTTCCAACAGTTACAGCGAAAATCATTGGGGATGCAAGTACTCAAACAGATGCCCTGAAACTTC
CACCTTCCCAACCTCCAAGGCTTTTGAAGAACAAAGCTTTATTGTGCAAACCCATTACACAGACTAAAGC
CACGTCATGTAAACCACATACTCAAAACAAAGAATGCCAGACAGACACTCCAAGTGAGCCCCAGGTTATG
GTGGTACCAGTCCCTGTGCCAGTGTTTGTTCCCATACCTCTTCATCTTTACACCCAGTATACTCCTGTCC
CCTTTGGGATTCCAGTTCCTATGCCTGTTCCCATGTTTATTCCATCCTCTATGGATAATGATGAGAAAGC
AACTGAGGGCATTGAAGACATTAAAGAGAAACTTGCCACACATCCGTTTGAAGCAGATCTCCTTGAGATG
GCAGAAATGATTGCAGAAGATGAAGAGAAGGAGAAAACTTTATCCCAGGGAGAATCTCAAACTTCTGAAC
AAGAACTGTTTCTAGACACCAAGATATTTGAAAAAGACCAAGGAAGTACATATAGTGGTGATCTTGAGTC
AGAAGCAGTATCAACTCCACACAGCTGGGAAGAAGAGCTGAATCATTACGCATTAAAGTCGAATGCTGTG
CAAGATGCTGATTCAGAACTGAAACCGTTTTCAAAAGGGGAAACAGAGCAGGATCTGGAGGCAGACTTCC
CATCAGAATCTTTTGACCCACTTAATAAAGGACAGGGGATCCAGGCACGTTCTCGAACAAGACGAAGACA
CAGAGATGGATTCCCCCAGCCCAGACGGCGAGGGAGGAAGAAGTCTGTGGTACCTGTGGAACCCAGAAGT
CTTATTCAAGGAGCCTTGCAAGGGTGCTCAGTGTCTGGAATGACACTGAAGTATATGTATGGGGTAAATG
CCTGGAAGAACTGGGTTCAGTGGAAAAATGCCAAGGATGAACAAGGAGATCTGAAGTGCGGGGGAGGTGA
ACTTGCCTCTGCTAGTCCGTGTTCTGACTCCTTAGGAAGTGCTCAAGACCATGCCCTCTCTCAAGAATCC
TCAGAGCAAGGCTGTAAAGCCCGCTCTGTGAAACTGAAGGAAGATATTCTGTCCTGCACTTTTTCTGAGT
TGAGTTTGGGCTTATGCCAGTTTATCCAAGAGGTGCGGAGACCAAATGGTGAAAAGTATGACCCAGACAG
TATCTTATACCTGTGCCTTGGAATTCAGCAGTACCTATTTGAAAATGGTAGAATAGATAACATTTTTACG
GAGCCCTATTCCAGATTTATGATTGAACTTACCAAACTCTTGAAAATATGGGAACCTACAATACTTCCTA
ATGGTTACATGTTCTCCCGCATTGAAGAAGAGCATCTGTGGGAGTGCAAACAGCTGGGCGCTTACTCGCC
CATTGTCCTGTTAAACACCCTCCTTTTTTTCAATACCAAATACTTCCAACTAAGGAATGTTACTGAGCAC
TTGAAGCTGTCCTTTGCCCACGTGATGCGCCGGACCAGGACTCTGAAGTACAGCACCAAGATGACGTACC
TGAGGTTCTTCCCGCCTTTACAGAAGCCGGAGTCAGAGCCAGATAAGGTAACTATTGGCAAGAGGAAACG
AAATGAAGACGACGAGGCCCCAGTGGGAGTGGAGATGGCAGAGAACACTGACAACCCGCTGAGGTGCCCG
GTTCGGCTTTATGAGTTTTACCTGTCAAAATGTTCTGAAAGTGTGAAGCAGAGGAGTGATGTGTTCTACC
TTCAGCCGGAGCGCTCCTGTGTTCCTAACAGTCCCATGTGGTACTCCACATTCCCCATAGACCCTGGAAC
CCTGGACACCATGTTGACGCGCATTCTCATGGTGAGGGAGGTACATGAAGAACTTGCCAAAGCCAAATCT
GAAGACTCTGATGCTGAATTATCAGATTAA

Translation (1549 aa):
MAEREVETGPRKRFEQKSDAVFDEIVENCGVMDTEMSEDTDHNLTPTLASMSYGMPNQTGSENSLLDEDD
YFLNSGDLAGIPVVSSDNEDEQDCSSKDNLVSSVHTDGSLEVERRAAHQESDNENEIQIQNQLKKDFPKQ
FDQVSVFKSIRKDFCLVRENSKETFSGKEKNRDLTYHEREKRLDKPHKGLDSRLKSSFFDKAANQVEETL
HTHLPQNPETNFRDSSYPFASKESIGSELGNSFASNIRIKEEPLDDEYDRAVAPQQGLLDRVKDEPDNAQ
EYSHGQQQKTQEGELKISAVFSVSGSPLAPQLTTGFQPSLASPGMNKMLPSVPATAVRVSCSGCKKILQK
GQTAYQRKGSTQLFCSTLCLTGYTVPPARPPPPLTKKTCSSCSKDILNPKDVISAQFENSTTSKDFCSQS
CLSTYELKKKPIVTINTNSISTKCSMCQKNAVIRHEVNYQNVVHKLCSDACFSKFRSANNLTMNCCENCG
GYCYSGSGQCHVLQIEGQSKKFCSSMCVTSYKQKSAKITPCALCKSLRSSAEMIENTNSLGKTELFCSVN
CLSAYRVKMVTSAGVQVQCNSCKTSAIPQYHLAMSDGSIRNFCSYSCVVAFQNLFNKPTGMNSSVVPLSQ
GQVIVSIPTGSSASAGGGSTPAVSPTSINSSAAAGLQRLAAQSQHVGFARSVVKLRCQHCNRLFATKPEL
LDYKGKMFQFCGKNCCDEYKKINNVMAMCEYCKIEKIIKETVRFSGADKSFCSEGCKLLYKHDLGKRWGS
HCKMCSYCLQTSPKLIQNNLGGKVEDFCCEECMSKYTVLFYQMAKCDGCKRQGKLSESLKWRGDIKHFCN
LLCILMFCHQQTVCDPPLQNNAVASISMVQAASAGPPSLRKDSTPVIANVVSLASAPAAQPTANTNSVLQ
GAVPTVTAKIIGDASTQTDALKLPPSQPPRLLKNKALLCKPITQTKATSCKPHTQNKECQTDTPSEPQVM
VVPVPVPVFVPIPLHLYTQYTPVPFGIPVPMPVPMFIPSSMDNDEKATEGIEDIKEKLATHPFEADLLEM
AEMIAEDEEKEKTLSQGESQTSEQELFLDTKIFEKDQGSTYSGDLESEAVSTPHSWEEELNHYALKSNAV
QDADSELKPFSKGETEQDLEADFPSESFDPLNKGQGIQARSRTRRRHRDGFPQPRRRGRKKSVVPVEPRS
LIQGALQGCSVSGMTLKYMYGVNAWKNWVQWKNAKDEQGDLKCGGGELASASPCSDSLGSAQDHALSQES
SEQGCKARSVKLKEDILSCTFSELSLGLCQFIQEVRRPNGEKYDPDSILYLCLGIQQYLFENGRIDNIFT
EPYSRFMIELTKLLKIWEPTILPNGYMFSRIEEEHLWECKQLGAYSPIVLLNTLLFFNTKYFQLRNVTEH
LKLSFAHVMRRTRTLKYSTKMTYLRFFPPLQKPESEPDKVTIGKRKRNEDDEAPVGVEMAENTDNPLRCP
VRLYEFYLSKCSESVKQRSDVFYLQPERSCVPNSPMWYSTFPIDPGTLDTMLTRILMVREVHEELAKAKS
EDSDAELSD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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