NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS27126.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
27126.1 Public Mus musculus 14 Nop9 23 108 98 CCDS HistoryNCBI Gene:67842Re-query CCDS DB by CCDS ID:27126.1See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 27126.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000019441.8 ENSMUSP00000019441.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000019441.8Link to Ensembl Protein Viewer:ENSMUSP00000019441.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000019441Re-query CCDS DB by Protein ID:ENSMUSP00000019441
Original member Current member NCBI NM_026403.3 NP_080679.3 Accepted alive Link to Nucleotide Sequence:NM_026403.3Link to Protein Sequence:NP_080679.3Re-query CCDS DB by Nucleotide ID:NM_026403Re-query CCDS DB by Protein ID:NP_080679Link to BLAST:NP_080679.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_080679.3 636 Q8BMC4 636 100% 0 0

Chromosomal Locations for CCDS 27126.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 55745774 55746020 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55746161 55746610 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55749332 55749442 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55749992 55750133 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55751053 55751245 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55752058 55752198 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55752537 55752662 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55752812 55753048 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55753260 55753365 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55753641 55753798 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1911 nt):
ATGGGGTTGGGGCCGCGTTCCGCTCACAAAGCGCGACGCCAGTTCTCGGGTGCCGGCCGGCGGGGACGCG
CGGCCCGGGGTTCGGGACGTCCCCCTCCCGGCCGCGATGGTTATCCCCGGCTGCCGGCAGCCGCGCGTGC
GGAGCAGGCCCCCGAGGCTCTCCCGCATCTGAGCCCGGAGGCTCTTGGATATTTCCGACGGGCGCTGTCA
GCGCTAAAAGTGGCTCCCGACGCCGCCGAAGAACGAGAGTTGATGGCGCGCAATATTTTGAAGGAAGTGG
AGGCTCAGGCTCTAGCCTTGGCCACGAACAGGACTGGTAGCGAAATGCTGCAGGAGCTTTTGGGGTTCAG
TCCTTTGAAACCCCTGTGTCGAGTGTGGGCCGCTCTGCGCCCCAACTTGCGCTTCGTGGCTTGTCATCGG
TGTGGGGTCCACGTATTACAAAGTGCTTTGCTGCAGCTACCTCGATTGCTGAGGCGTCCTGCGGAGGCAG
AGGAGGAGGAGGAGGAAGAGGAGGAGGGTGGTCCCTCGCAAACTCTGGAGGAGCTAGTCCTGGGACTAGC
CGCTGAAGTGTGTGATGATTTTCTGTTCTTCTGTGGAGACACGCATGGCAGCTTCGTGGTCAGAACTCTG
CTGCAGGTCTTGGGAGGTACTCTTTTGGAGTCCGAGAGAGGCAAGCCCCGTGGCTCCCAGTCGTCTGAAA
CACAGAGGACTTCAGCTCGGGAATGTAAACCAACTGATTTTGAGGTTCCTAAAACCTTCTTGAATCGCCT
TCAGGACCTGAGCGCCTGCTTTCTGAAGGACATTGCTGTATTTATCACCGACAAGATCTCCAGCTTTTGT
CTTCAGGTGGCCTTACAAGTCCTCCACCAAAAATTACCTCAGCACTGTGCCCACCTCTGCGATGCAGTCA
TTGATTACCTGAGTTCTCGGAATTCTTCAGCAGATGGCAGCCCTCTACTCCTGTTTCTTCGGGATCAGAC
GAGCTCTAGACTCTTGGAGCAGGTGCTGCTGGTATTAGAAGCAGAGAGACTCCAGCGCCTCTATAAGGAC
CACTTCCAGGGTCAGCTATGCTCCTTGGCTGAGCATCCCATTGCGAACTTCCCTTTGCAGCGCTTGCTGG
ATGCAATCACTTCCCCTGAGCTGCTGTCCCTTGTGTTTGAGGAGCTGAGCCCTGCCTTGGAAATGGTGCT
GGCCCAGGGCCACCCAGGGGTCGTCGTCGCCCTGGTGGAAGCCTGCCGCAGGGTTGGGACTCACCAAGCC
CAGGTCTTGCAGCTGTTATTTGAGGCATTTCATTGTGCAGAGCCCCCGTCCCGGCAAGCAGCCTGCGTGC
CTCTCTTTGCTGCTTTGTTGGCTTATGAGGTATACTATGAACTAATGGAGGAGGAGGGGGCTGTGCCTGC
AGAGCATCAGGTTGAAATGGCCACAGCCAGAGCGCTGAGGGAGGTGACTGTACTTGGGTCTCTACTGCTC
CAGCATTTGCTGTATTTTTCTAATCCTGGACTTGTACTTCGAAGTCTGAGTGCCTTGACCGGACCACAGC
TTCTGACTCTGGCCCAAAGCCCCGCTGGCTCTCATGTATTTGATGCCATCCTGAGTAGCCCCTCAGTGAC
ACACAAGCAGCGTCGTCGTGTGCTGAAGACCCTAAAGGGACAGTATGTGGCTCTTGCCTGTAGCCGCCAT
GGCAGCCGTGTATTAGATGCCATCTGGAGTGGAGCAGCTTTGGGGGCTCGGAAGGAAATTGCTGCTGAAT
TGGGAGAAAAGAACCAGGAGTTGATTCAAGATCCTTTTGGCCACCATGTGGCTCGAAATGTGGCCCTTAC
TACCTTCTTGAAGAGGCGAGAGGCTTGGGAACAACAGCAAAGTACTGTGGCCAAGCGGAGGCGGGCATTG
AGCTCTATACTTGAAGACTGA

Translation (636 aa):
MGLGPRSAHKARRQFSGAGRRGRAARGSGRPPPGRDGYPRLPAAARAEQAPEALPHLSPEALGYFRRALS
ALKVAPDAAEERELMARNILKEVEAQALALATNRTGSEMLQELLGFSPLKPLCRVWAALRPNLRFVACHR
CGVHVLQSALLQLPRLLRRPAEAEEEEEEEEEGGPSQTLEELVLGLAAEVCDDFLFFCGDTHGSFVVRTL
LQVLGGTLLESERGKPRGSQSSETQRTSARECKPTDFEVPKTFLNRLQDLSACFLKDIAVFITDKISSFC
LQVALQVLHQKLPQHCAHLCDAVIDYLSSRNSSADGSPLLLFLRDQTSSRLLEQVLLVLEAERLQRLYKD
HFQGQLCSLAEHPIANFPLQRLLDAITSPELLSLVFEELSPALEMVLAQGHPGVVVALVEACRRVGTHQA
QVLQLLFEAFHCAEPPSRQAACVPLFAALLAYEVYYELMEEEGAVPAEHQVEMATARALREVTVLGSLLL
QHLLYFSNPGLVLRSLSALTGPQLLTLAQSPAGSHVFDAILSSPSVTHKQRRRVLKTLKGQYVALACSRH
GSRVLDAIWSGAALGARKEIAAELGEKNQELIQDPFGHHVARNVALTTFLKRREAWEQQQSTVAKRRRAL
SSILED


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH