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Report for CCDS39183.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
39183.1 Public Mus musculus 5 Enoph1 23 108 98 CCDS HistoryNCBI Gene:67870Re-query CCDS DB by CCDS ID:39183.1See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 39183.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000031268.7 ENSMUSP00000031268.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000031268.7Link to Ensembl Protein Viewer:ENSMUSP00000031268.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000031268Re-query CCDS DB by Protein ID:ENSMUSP00000031268
Original member Current member EBI ENSMUST00000169390.7 ENSMUSP00000129704.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000169390.7Link to Ensembl Protein Viewer:ENSMUSP00000129704.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000169390Re-query CCDS DB by Protein ID:ENSMUSP00000129704
Original member Current member NCBI NM_001163035.1 NP_001156507.1 Accepted alive Link to Nucleotide Sequence:NM_001163035.1Link to Protein Sequence:NP_001156507.1Re-query CCDS DB by Nucleotide ID:NM_001163035Re-query CCDS DB by Protein ID:NP_001156507Link to BLAST:NP_001156507.1
Original member Current member NCBI NM_026421.3 NP_080697.2 Accepted alive Link to Nucleotide Sequence:NM_026421.3Link to Protein Sequence:NP_080697.2Re-query CCDS DB by Nucleotide ID:NM_026421Re-query CCDS DB by Protein ID:NP_080697Link to BLAST:NP_080697.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001156507.1 257 Q8BGB7-1 257 100% 0 0
NP_080697.2 257 Q8BGB7-1 257 100% 0 0

Chromosomal Locations for CCDS 39183.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 5 (NC_000071.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 100040219 100040302 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 100059140 100059241 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 100060974 100061167 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 100062143 100062275 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 100063759 100063882 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 100067799 100067935 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (774 nt):
ATGGTCGTGGTTTCCGTGCCCGCCGAAGTCACCGTAATCCTGTTAGATATCGAAGGTACCACAACCCCGA
TTGCTTTCGTGAAGGATGTTTTATTTCCGTACATCAAAGAAAATGTCAAGGAGTACCTGCAGACCCACTG
GGAGGAGGAGGAGTGTCAGCAGGACGTCAGCCTGCTGAGGAAACAGGCCGAGGAAGATGCACATCTGGAC
GGGGCTGTTCCGATACCCGTGGCTTCTGGCAGTGATCTGCAGCAGATGATCCAGGCTGTGGTGGACAACG
TGTACTGGCAGATGTCCCATGACCGAAAGACCACAGCGCTCAAACAGCTGCAAGGCCACATGTGGAAGGC
AGCTTTCACGGCTGGCCGCATGAAGGCAGAGTTCTTTGCAGATGTGGTTCCTGCAGTCAGAAGGTGGAGA
GAGGCTGGGATGAAGGTATACATCTATTCTTCAGGGAGCGTGGAGGCACAGAAGCTGCTCTTCGGCCATT
CCACAGAGGGAGACATTCTTGAGCTCATCGACGGTCACTTTGACACCAAGATTGGACACAAAGTGGACAG
TGAGAGTTACCGGAAGATTGCTGATAGCATCGGTTGTTCAACCAACAACATCCTGTTTCTCACGGATGTC
ACCGTAGAGGCCAGTGCTGCTGAGGAGGCGGACGTGCACGTGGCTGTGGTGGTGCGACCTGGCAACGCGG
GGCTCACTGACGACGAGAAGACATACTACAACCTCATCACGTCCTTCAGCGAGCTCTACCTGCCGTCCAC
CTAG

Translation (257 aa):
MVVVSVPAEVTVILLDIEGTTTPIAFVKDVLFPYIKENVKEYLQTHWEEEECQQDVSLLRKQAEEDAHLD
GAVPIPVASGSDLQQMIQAVVDNVYWQMSHDRKTTALKQLQGHMWKAAFTAGRMKAEFFADVVPAVRRWR
EAGMKVYIYSSGSVEAQKLLFGHSTEGDILELIDGHFDTKIGHKVDSESYRKIADSIGCSTNNILFLTDV
TVEASAAEEADVHVAVVVRPGNAGLTDDEKTYYNLITSFSELYLPST


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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