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Report for CCDS21374.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21374.1 Public Mus musculus 7 Mrps11 23 108 98 CCDS HistoryNCBI Gene:67994Re-query CCDS DB by CCDS ID:21374.1See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21374.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000032840.4 ENSMUSP00000032840.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000032840.4Link to Ensembl Protein Viewer:ENSMUSP00000032840.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000032840Re-query CCDS DB by Protein ID:ENSMUSP00000032840
Original member Current member NCBI NM_026498.2 NP_080774.2 Accepted alive Link to Nucleotide Sequence:NM_026498.2Link to Protein Sequence:NP_080774.2Re-query CCDS DB by Nucleotide ID:NM_026498Re-query CCDS DB by Protein ID:NP_080774Link to BLAST:NP_080774.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_080774.2 191 Q9DCA2 191 99.4764% 0 1

Chromosomal Locations for CCDS 21374.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 78783359 78783423 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 78783573 78783680 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 78788675 78788773 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 78790637 78790766 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 78791874 78791939 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 78792642 78792749 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (576 nt):
ATGCAGGTTTTAAGAAACTCCGGGTCGTGGCTCCTGCGGTCCTGGGCTGGACATGGAATGACCAGGTTTG
TGGGCATTGCCCCAGCTAAGAATATCCACACCGGAGCCCCGAGATTAGAAGACTCAGCTGCCAGGCAGAA
CACTGAAAGGGAAGCGGCTCCAAGTCGCTTCAGCCTTTACCCTCCGGTTCCAGGACAGGAGAGCTCTCTG
CAGTGGGCAGGGATGAAGTTTGAGGACGTCCCAATTGCACACATTAAAGCAACCTACAACAACACACAGA
TCCAGGTAGTCTCTGCCACCAATGCGTCCCTGGCCCGCGCCTCCTGTGGCACAGAAGGCTTTCGCAATGC
CAAGAAGGGCACCGGCATCGCCGCACAGACAGCAGGCATAGCTGCCGCAGCAAAAGCCACAGGAAAGGGA
GTGACCCACATCAGAGTCGTAGTGAAAGGCATGGGGCCAGGACGCTGGTCTGCCATCAAAGGACTGACCA
TGGGGGGTCTGGAAGTGATCTCAATCACAGACAACACCCCGGTCCCACACAATGGCTGCCGACCCCGGAA
GGCTCGAAGGCTGTGA

Translation (191 aa):
MQVLRNSGSWLLRSWAGHGMTRFVGIAPAKNIHTGAPRLEDSAARQNTEREAAPSRFSLYPPVPGQESSL
QWAGMKFEDVPIAHIKATYNNTQIQVVSATNASLARASCGTEGFRNAKKGTGIAAQTAGIAAAAKATGKG
VTHIRVVVKGMGPGRWSAIKGLTMGGLEVISITDNTPVPHNGCRPRKARRL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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