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Report for CCDS23903.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
23903.1 Public Mus musculus 10 Zfp365 23 108 98 CCDS HistoryNCBI Gene:216049Re-query CCDS DB by CCDS ID:23903.1Re-query CCDS DB by GeneID:216049See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 23903.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000064656.7 ENSMUSP00000067197.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000064656.7Link to Ensembl Protein Viewer:ENSMUSP00000067197.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000064656Re-query CCDS DB by Protein ID:ENSMUSP00000067197
Original member Current member NCBI NM_178679.2 NP_848794.1 Accepted alive Link to Nucleotide Sequence:NM_178679.2Link to Protein Sequence:NP_848794.1Re-query CCDS DB by Nucleotide ID:NM_178679Re-query CCDS DB by Protein ID:NP_848794Link to BLAST:NP_848794.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_848794.1 408 Q8BG89-1 408 100% 0 0

Chromosomal Locations for CCDS 23903.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 67888830 67889091 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 67889953 67889990 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 67897434 67897614 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 67909201 67909946 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1227 nt):
ATGCAACAGACGACTTTTGAGGAAAGCCGGTACCATTGGCAGGACTCGCTGGAGAATGTCGCTGTGTGCC
TGCCATTCCGCTGCCCGAGGTGTGGAGACCATACCAGATTTAGAAGCTTGTCATCCTTGAGGGCCCATCT
GGAATTCAGTCACAGCTACGAAGAGCGGACCCTCCTGACAAAATGCAGCCTCCTGCCCTCTCTCAAGGAC
ACAGAGCTTCTCAGGTCCTCGGAACTCCCGAAGCAGGGAAAAGTACTCCGGGGCCACGCAAAGGTGACCA
AGCAGAAGTCGAGCTATGTTAACTTGTACAGCATCTCCCACGGGCACTCCAAGGACACGAAACCCTTTGA
GATGGTGGCAGAGAGGCCCGTGTCCTATGTGCAGACCTACACGGCCGTGGACATCCGGGCTGACTCTCTG
GATGCTCCCTGCGCCAGCCCTGGTCTCCCCACCCAAGATACCAAAGCTGCTTTCGAGGCTCACGTCCGAG
AAAAGTTCAATCGCATGGTAGAGGCCGTGGACAGGACCATCGAGAAGAGAATCGACAAACTCACCAAAGA
GTTGGCCCAGAAAACCGCCGAACTGTTGGAAGTCCGGGCAGCCTTTGCGCAGCTGACTCAGAAGAAGCAG
GAGGTCCAGAGGAGAGAGCGGGCCCTGAACAAACAGGTAGATGTGGCCGTGGAAATGATCGCAGTGCTGA
AGCAGCGTCTGACGGAATCCGAGGAGGAGCTCCTGAGGAAAGAGGAAGAAGTCGTCACATTCAACCATTT
CCTGGAGGCAGCGGCTGAGAAGGAGGTTCAAGGAAAAGCGAGGCTCCAGGACTTTATTGAAAATCTGCTG
CAACGGGTAGAATTGGCGGAGAAGCAGTTGGAATATTATCAAAGCCAGCAAGCCTCCGGTTTTAGCTGTG
ACACTAGTGAGCATATGCTCACAGACATCCCATCGAACAGGAAGCCCAGATGCCTAAGCCGAGGGCACCA
GCATTCTGTTTGCAACCATCCTGAGATGAGGGCCCATTTCCATCTGAAGGGGAGAAGCTACCTGAAGAAA
GCCAAGGATGAGCGAGCCGGGATGCAGCCCGCCAAGGCCATTCACGAACCGGCTGAGTCTCCAAGAGAAT
TCTTCAGACCAGCCAAGAAAGGGGAACACCTGGGTCTGAGCCGGAAAGGGAATTTCAGGCCCAAAATGGC
TAAAAAGAAGCCTACAGCAATCGTGAATATCATCTAG

Translation (408 aa):
MQQTTFEESRYHWQDSLENVAVCLPFRCPRCGDHTRFRSLSSLRAHLEFSHSYEERTLLTKCSLLPSLKD
TELLRSSELPKQGKVLRGHAKVTKQKSSYVNLYSISHGHSKDTKPFEMVAERPVSYVQTYTAVDIRADSL
DAPCASPGLPTQDTKAAFEAHVREKFNRMVEAVDRTIEKRIDKLTKELAQKTAELLEVRAAFAQLTQKKQ
EVQRRERALNKQVDVAVEMIAVLKQRLTESEEELLRKEEEVVTFNHFLEAAAEKEVQGKARLQDFIENLL
QRVELAEKQLEYYQSQQASGFSCDTSEHMLTDIPSNRKPRCLSRGHQHSVCNHPEMRAHFHLKGRSYLKK
AKDERAGMQPAKAIHEPAESPREFFRPAKKGEHLGLSRKGNFRPKMAKKKPTAIVNII


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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