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Report for CCDS37390.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37390.1 Public Mus musculus 16 Krtap6-5 23 108 98 CCDS HistoryNCBI Gene:68484Re-query CCDS DB by CCDS ID:37390.1See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37390.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000074637.3 ENSMUSP00000074211.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000074637.3Link to Ensembl Protein Viewer:ENSMUSP00000074211.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000074637Re-query CCDS DB by Protein ID:ENSMUSP00000074211
Original member Current member NCBI NM_130856.2 NP_570926.1 Accepted alive Link to Nucleotide Sequence:NM_130856.2Link to Protein Sequence:NP_570926.1Re-query CCDS DB by Nucleotide ID:NM_130856Re-query CCDS DB by Protein ID:NP_570926Link to BLAST:NP_570926.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_570926.1 78 Q925H3 78 100% 0 0

Chromosomal Locations for CCDS 37390.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 16 (NC_000082.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 89047607 89047843 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (237 nt):
ATGTGTGGCTACTACGGAAACTACTATGGCGGCAGAGGCTATGGCTGCTGTGGCTGTGGAGGCCTGGGCT
ATGGCTATGGAGGCTTGGGCTGTGGCTATGGCTCCTACTATGGCTGTGGCTACCGTGGACTGGGCTGTGG
CTATGGCTATGGCTGTGGCTATGGCTCACGCTCTCTCTATGGCTGTGGCTATGGATGCGGTTCTGGCTAT
GGCTCTGGATTTGGCTACTACTACTGA

Translation (78 aa):
MCGYYGNYYGGRGYGCCGCGGLGYGYGGLGCGYGSYYGCGYRGLGCGYGYGCGYGSRSLYGCGYGCGSGY
GSGFGYYY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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