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Report for CCDS15757.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
15757.2 Public Mus musculus 2 Rnf208 23 108 98 CCDS HistoryNCBI Gene:68846Re-query CCDS DB by CCDS ID:15757.2See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 15757.2

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000060818.1 ENSMUSP00000057742.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000060818.1Link to Ensembl Protein Viewer:ENSMUSP00000057742.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000060818Re-query CCDS DB by Protein ID:ENSMUSP00000057742
Original member Current member EBI ENSMUST00000114355.1 ENSMUSP00000109995.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000114355.1Link to Ensembl Protein Viewer:ENSMUSP00000109995.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000114355Re-query CCDS DB by Protein ID:ENSMUSP00000109995
Original member Current member NCBI NM_176834.2 NP_789804.2 Accepted alive Link to Nucleotide Sequence:NM_176834.2Link to Protein Sequence:NP_789804.2Re-query CCDS DB by Nucleotide ID:NM_176834Re-query CCDS DB by Protein ID:NP_789804Link to BLAST:NP_789804.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_789804.2 265 Q8K0W3 265 100% 0 0

Chromosomal Locations for CCDS 15757.2

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 25243296 25244093 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (798 nt):
ATGCCAGCTGACCCTGGGCCTGAGGTGGGCAGTGGATGGCCGGGCCTCCTCATGTCCTGCCTGAAAGGCC
CCCATGTCATCCTCAAAATGGAGGCCATGAAGATTGTCCACCCTGAAAAGTTCCCTGAGCTCCCGGCGGC
CACCCCCTGCTTCCCTCCTGCACCCAGGCCCACTCCCACTCTGGCACCCAAGCGTGCTTGGCCCTCAGAC
ACAGAGATCATTGTCAACCAGGCATGTGGGGGGGACATGCCTACCTTGGAAGGAGCATCCCACACTCCAC
CCTTGCCAAGGCGGCCCCGCAAAGGCAGTTCTGAGTTGGGCTTCCCCCGGGTGGCACCAGTGGATGAGGT
CATTGTAAATCAGTATGTGATTCGACCTGGCCCAACAGCCTCTGCACCTTCATCGTCTGGGCCAGTGATA
GCAGGTGAGCCCCTGGAATGCCCCACCTGTGGGCATACATACAACGTCACTCAACGGCGGCCCCGTGTGC
TGTCTTGCCTGCACTCCGTGTGTGAGCAGTGCCTGCAGATTCTTTATGAGTCTTGCCCTAAGTACAAGTT
CATCTCCTGTCCCACCTGCCACCGTGAGACTGTGCTCTTCACTGACTATGGCCTGGCTGCACTGGCTGTC
AACACATCCATCCTGAGCCGCTTGCCACCTGAAGCCCTGACTGCCCCATCCGGTGGACAGTGGGGGGGTG
AATCTGAAGGCAGCTGCTACCAGACCTTCCGGCAGTACTGTGGAGCTGCATGCACCTGCCATGTGCGGAA
CCCACTATCTGCCTGTTCCATCATGTAG

Translation (265 aa):
MPADPGPEVGSGWPGLLMSCLKGPHVILKMEAMKIVHPEKFPELPAATPCFPPAPRPTPTLAPKRAWPSD
TEIIVNQACGGDMPTLEGASHTPPLPRRPRKGSSELGFPRVAPVDEVIVNQYVIRPGPTASAPSSSGPVI
AGEPLECPTCGHTYNVTQRRPRVLSCLHSVCEQCLQILYESCPKYKFISCPTCHRETVLFTDYGLAALAV
NTSILSRLPPEALTAPSGGQWGGESEGSCYQTFRQYCGAACTCHVRNPLSACSIM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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