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Report for CCDS48691.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
48691.1 Public Mus musculus 10 Glipr1l1 23 108 98 CCDS HistoryNCBI Gene:69286Re-query CCDS DB by CCDS ID:48691.1See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 48691.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000073617.4 ENSMUSP00000073302.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000073617.4Link to Ensembl Protein Viewer:ENSMUSP00000073302.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000073617Re-query CCDS DB by Protein ID:ENSMUSP00000073302
Original member Current member NCBI NM_027018.1 NP_081294.1 Accepted alive Link to Nucleotide Sequence:NM_027018.1Link to Protein Sequence:NP_081294.1Re-query CCDS DB by Nucleotide ID:NM_027018Re-query CCDS DB by Protein ID:NP_081294Link to BLAST:NP_081294.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_081294.1 236 Q9DAG6 236 100% 0 0

Chromosomal Locations for CCDS 48691.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 112060310 112060507 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 112062190 112062432 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 112072240 112072340 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 112076105 112076190 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 112078364 112078446 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (711 nt):
ATGGCCCTGAAGAAGAAACTTAATTTTTTATGGACATTAGTTCTGTATTTGATAGCCAGCAGACTGCCCA
AGGCATTCGGCAAAGATCTTCCTAGGGTGCCAACTATCACGGATCCGAAATTTATAGATGCATTCCTCAA
CATCCACAATGAACTGCGACGCAAGGTCCAGCCCCCGGCAGCTGATATGAATCAACTGTTTTGGGACCAG
CAGCTGGCAAAACTAGCGAAAGCATGGACTAGAGAGTGCAAACTTGCCCATAATCCCTGTATCAAACAAC
GATACGAATGTCTTGAGGACTATGACTTTATTGGAGAAAATATTTATTTGGGTAGAATTGAAACCCAACC
AGAAGATGTTGTTATTAATTGGTATAATGAAAGTAAATATTTTAATTTTGATTTTAATACCTGTTCTGAA
ATGTGTGGCCATTATACACAGGTAGTTTGGGCCAAAACGGTTAAAATTGGTTGTGCAGTTTCAAATTGTC
CTAATCTCAAGGGCTTTTCAGCTGGGCTATTTGTATGTAATTATTCGCCAGCAGGAAACTTTATAGGCTT
CAGACCTTACACGAGAGGAGACTCTTGCTCTATGTGTGGACAAAAGACGTGTGAGAATAGTCTCTGCCGT
CCCATGAATCGGAAGACACCTCACCACAAAGCGGCATGCCATGTACTTGTGCTTGGTTTTATTCTTCAGA
GCCTACTTTAA

Translation (236 aa):
MALKKKLNFLWTLVLYLIASRLPKAFGKDLPRVPTITDPKFIDAFLNIHNELRRKVQPPAADMNQLFWDQ
QLAKLAKAWTRECKLAHNPCIKQRYECLEDYDFIGENIYLGRIETQPEDVVINWYNESKYFNFDFNTCSE
MCGHYTQVVWAKTVKIGCAVSNCPNLKGFSAGLFVCNYSPAGNFIGFRPYTRGDSCSMCGQKTCENSLCR
PMNRKTPHHKAACHVLVLGFILQSLL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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