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Report for CCDS35737.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
35737.1 Public Mus musculus 1 1700025G04Rik 23 108 98 CCDS HistoryNCBI Gene:69399Re-query CCDS DB by CCDS ID:35737.1See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 35737.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000044581.13 ENSMUSP00000036406.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000044581.13Link to Ensembl Protein Viewer:ENSMUSP00000036406.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000044581Re-query CCDS DB by Protein ID:ENSMUSP00000036406
Original member Current member EBI ENSMUST00000187603.6 ENSMUSP00000140950.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000187603.6Link to Ensembl Protein Viewer:ENSMUSP00000140950.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000187603Re-query CCDS DB by Protein ID:ENSMUSP00000140950
Original member Current member NCBI NM_197990.3 NP_932107.1 Accepted alive Link to Nucleotide Sequence:NM_197990.3Link to Protein Sequence:NP_932107.1Re-query CCDS DB by Nucleotide ID:NM_197990Re-query CCDS DB by Protein ID:NP_932107Link to BLAST:NP_932107.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_932107.1 121 Q8K207 121 100% 0 0

Chromosomal Locations for CCDS 35737.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 151893394 151893432 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151915482 151915542 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151921047 151921123 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151980426 151980520 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 152006545 152006638 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (366 nt):
ATGGGCTGTGCCTCTGCCAAGCATGTCGCTACTGTTCAAAATGAAGAGGAAGCACAGAGAGGGAAAAGCT
ACCAGAATGGAGATGTGTTTGGCGATGAGTATAGGATCAAACCCGTGGAAGAGGTCAAATACATGAAAAA
TGGGGCAGAAGAGGAGCAGAAAATAGCAGCCAGAAACCAAGAAAACCTGGAAAAAAGTGCCAGCTCGAAC
ACAAGGCTTAAAACTAATAAAGAAATCCCTGGATTAGTTCATCAACCCAGAGCAAACATGCACATCTCTG
AAAGCCAACAAGAATTCTTCAGAATGCTGGATGAAAAAATCGAAAAGGGTCGGGATTACTGTTCTGAAGA
AGAGGATATCACATAG

Translation (121 aa):
MGCASAKHVATVQNEEEAQRGKSYQNGDVFGDEYRIKPVEEVKYMKNGAEEEQKIAARNQENLEKSASSN
TRLKTNKEIPGLVHQPRANMHISESQQEFFRMLDEKIEKGRDYCSEEEDIT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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