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Report for CCDS49636.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
49636.1 Public Mus musculus 15 Mroh4 23 108 98 CCDS HistoryNCBI Gene:69439Re-query CCDS DB by CCDS ID:49636.1See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 49636.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000023271.7 ENSMUSP00000023271.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000023271.7Link to Ensembl Protein Viewer:ENSMUSP00000023271.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000023271Re-query CCDS DB by Protein ID:ENSMUSP00000023271
Original member Current member NCBI NM_001177437.1 NP_001170908.1 Accepted alive Link to Nucleotide Sequence:NM_001177437.1Link to Protein Sequence:NP_001170908.1Re-query CCDS DB by Nucleotide ID:NM_001177437Re-query CCDS DB by Protein ID:NP_001170908Link to BLAST:NP_001170908.1

Chromosomal Locations for CCDS 49636.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 74606111 74606211 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74606401 74606475 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74606669 74606771 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74608111 74608233 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74609642 74609797 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74610213 74610389 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74610897 74611040 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74611244 74611355 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74611526 74611663 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74611871 74612055 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74613224 74613368 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74614303 74614457 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74614910 74615059 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74616091 74616185 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74616263 74616398 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74621101 74621205 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74624685 74624780 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74625422 74625557 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74626110 74626186 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74626278 74626400 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74627611 74627730 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74627953 74628069 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74628275 74628367 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74629354 74629443 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2952 nt):
ATGGTGGTCAATAAGATCAAGAACATGATGGTCATGGAGCAGGGCCAAGTACTAGACACCATCTGCCACT
TCCTAGAGAAGGAAAACCAGCTCTGGGAAAAGCCAGAGGTCTCATTCTGGAATCCTTCTGTTGAAAAGCT
CCTAGAGTTTCTCAACCTGGACCCCAGGAAGGCTACTGATAAGGCTTTCTTCTTCCACCTCTATGGCATG
ATCCTGCGTGAGTGCCCCAGCGTGGAGAAGGTGCAGTGCCACCTGGCCAGCCTCCTGGATTTGTCCCATC
AGCACTCCAGACAGCGGGAGGGCATTGCACTGGCTGTGGGCCTGGCCTCCACCAAGCACTTGGAGGAGGT
GTGGGCCCTGTTGGAGCACCTGGGCCGTACCAAGTTTCTGCAATCAGTTGCTGCAACAGAGGACAGCCAG
GATGAGATCCTGAAGTCCAGCTTCCTCTCTGCGACCATCCTGCTCACCAGATCGCTCCAGGCAGAGTACA
GCTCCCAGAGGTACAAGTTCACACAGACACCAGAGCTCATCCAGTGCCTCTTGGGCATCCTCCAGAAAGA
GCCCAACTCCCTGACCAATTTCTTACGGCAGAAGATCATACTGGTCATCATAGGCCTGAGTAACCTGCGG
CCCAGATTCAAACCCCTTCTCAAGTCCCAGATCCTGAAGACCTGTCTGCAGACTGTGTATATGCTTCCTC
CTGCCAAGGACTCGAGGAATGACTTATTTTCAGTGGAGCAAGCCTCAGATACCACGGTGCTGTACAAGAA
GACAGTACGTGCCCTCGACCTTCTTCTCCAGAACTTCATTTCCGAGAACCCGAGCATGGACGAGGTCTGC
TTCCTCCTGCAGCACATAGAATACTGGCTGATGTCTGACAAGATCCATGAGCGCAGTCGGGCTGTCCAGT
CCATCTACCTGCTTCTGCAATATGTGGTGGACTCTTTGAAGCTTGCTAAAGAGGCCGTGCCGTCCTTGCT
GGGTCACCAAATAGGCATCCTGATTCTGCTGTGGCGGGACAAAGACAAGATCACACAGCAGCATTCTCAC
TTCTGTGTTTACCTGCTCATGGAGCTTGTTTTCCAGCAGAAGGGGAAATTGGTGGAGTCTGCGCAGTGGA
GTAAGATGAAGCACTTTGAAAGCAACGTGTTTAGAGAGTGGGAGATGAAGCTCTACCACCTGGTGAAGGT
CTTCAAGGAAGACCTGACAGTGGCACAGCACACACAACTGATCCTCACGCTGGTACACAGTCTAGGCAGT
TATAATCATCTCCACTCTGACCTTGCTGCTAAGCTCCTGCTGCTGATCTGTGTGGAGCCTGGCTTCAGGA
AGGAGCAGATAGCTGAGCTCTTGCAAGGCCTGTTCCAGGAACTGCCGAACATCCAGTCCAAGAGTGTCCA
GCAGGCCATAAGTCAGGCCACCTTGGCTCTGGGGACCCAGCATATTCAGGAGGTGGTGGAGGTGATCTTA
TCCCTATGTCAGCCCTCAGAGAGGTGGATCCTACCTCTGTGGAAGGCTCTGGCTGCCAATTACCAAGTGG
CTCGTGATGTTATAACTCTACTCTACATAAAGCTGAAACTGCGCCCACCAAGAAGGCTCCTCCAGTCCAC
ATATCGAGCCCGGCTGGTCTCGCTGATGGCTCTGGGCACCATTTATGAGCTCCTCTATACCAAGGAGTAC
CGGAACACAGTCTGCTGGGCCTTCTCGGGCATCCTTCTGGGCCTCCTCACAGAGCTCTACTACCTGCTGG
AGGTGGGCCTAGTGCAAGGCCTGTTTGACTACCAGGAAGACGATCTGGGCTCTAAGCCCCTCGGGCCCTG
CAGGATCTGCTTGGAAGCACTCAAGGGCCTCTTCTGGACCACCGAATACTGGGAAGTGTTTGCTGATGTG
AAGCTAATCCAGGGCTGGGAGCTCTTCGGGCAGTTGGAAACTTTCCCCAAGGGAGTGACCCTTTTGGCCA
GGGCCATGGCTCACTATAACTGCGAGATCAAGGCTGTCTTGGGGCAGGCTCTCATCTCCCTGAAGAGCAG
CGAAGAGCGAGACAACATTGTGGGCATCTGCATCATCACTGAGTTTCTCAACAGCCCAGATGTCTCCCAG
CACATGTCTTGGAAGACCATGTACAACTCCCTGAACCTGGGCCTTTCTAGTCGCAACCAGATGGTGCGGG
CTATGAGCTTGAAGGGACTGGGCAGCACCCTGATGCACCCTAAAAAGGCAACTCTGCTAAGAAGTAAGTT
GATGGAGCTGTTGGACAACTTTCTACAACCTGAGTTCAAGGACCCTGCTGGCTTGATGAAGATCATGGGC
CACCTCCTGCACTGTCTAAGTGCCCAGGGCATTGGAATTGTCAGCCTCAAGATCGCCCAGCACCTTCTCA
GCCTGTTCACAGATGAAAGGGCAGCGGTTCGGGAAGGTGCCATCTTCCTGTTTGGAGATGTCATCCACTA
TGGTGGCAAGAAGCTTAGGCAGAGCCTCAAGGATGTGGCTTCTCAGGCTACAGTACCCCTCCTCTTCAAT
ATGGCTGATCCCTGCCAAGAAGTAGCTATGAAGGCCAGGTTCACCTTCCTGCGCTGTGCCATCTTGTTAA
AGTGGGAGTTCCGGAAGGAGCTGTTTGGCAAGCTGGCATGGGGCCAAGGGCTGGGCGCTGCAAATGACAT
TTTTATCTACATGCTAGAAAGCAATGTCGGCAACTACCAGCAGTTCCTCAGTCAGGCCTTGACGTATCTG
GACAGTTCCCACATGACAGTGAAGCTGGCAGCCATGAAGTTCATCGGGGCATTGCTTCAGGACTATTTCA
ATGACCTATGCATATACTTGAGAAAGAAAGATGTGATCTTCCTTAAGAACTGTTTGGAGGCCCTCCGCCA
TGACACGGACTCCAGGACCCGAAGGTTCTACCTGAACTACTGGAATGATGCCGTGGAGCTATCTTACTAT
GTTCAAGACTAG

Translation (983 aa):
MVVNKIKNMMVMEQGQVLDTICHFLEKENQLWEKPEVSFWNPSVEKLLEFLNLDPRKATDKAFFFHLYGM
ILRECPSVEKVQCHLASLLDLSHQHSRQREGIALAVGLASTKHLEEVWALLEHLGRTKFLQSVAATEDSQ
DEILKSSFLSATILLTRSLQAEYSSQRYKFTQTPELIQCLLGILQKEPNSLTNFLRQKIILVIIGLSNLR
PRFKPLLKSQILKTCLQTVYMLPPAKDSRNDLFSVEQASDTTVLYKKTVRALDLLLQNFISENPSMDEVC
FLLQHIEYWLMSDKIHERSRAVQSIYLLLQYVVDSLKLAKEAVPSLLGHQIGILILLWRDKDKITQQHSH
FCVYLLMELVFQQKGKLVESAQWSKMKHFESNVFREWEMKLYHLVKVFKEDLTVAQHTQLILTLVHSLGS
YNHLHSDLAAKLLLLICVEPGFRKEQIAELLQGLFQELPNIQSKSVQQAISQATLALGTQHIQEVVEVIL
SLCQPSERWILPLWKALAANYQVARDVITLLYIKLKLRPPRRLLQSTYRARLVSLMALGTIYELLYTKEY
RNTVCWAFSGILLGLLTELYYLLEVGLVQGLFDYQEDDLGSKPLGPCRICLEALKGLFWTTEYWEVFADV
KLIQGWELFGQLETFPKGVTLLARAMAHYNCEIKAVLGQALISLKSSEERDNIVGICIITEFLNSPDVSQ
HMSWKTMYNSLNLGLSSRNQMVRAMSLKGLGSTLMHPKKATLLRSKLMELLDNFLQPEFKDPAGLMKIMG
HLLHCLSAQGIGIVSLKIAQHLLSLFTDERAAVREGAIFLFGDVIHYGGKKLRQSLKDVASQATVPLLFN
MADPCQEVAMKARFTFLRCAILLKWEFRKELFGKLAWGQGLGAANDIFIYMLESNVGNYQQFLSQALTYL
DSSHMTVKLAAMKFIGALLQDYFNDLCIYLRKKDVIFLKNCLEALRHDTDSRTRRFYLNYWNDAVELSYY
VQD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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