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Report for CCDS29424.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
29424.1 Public Mus musculus 19 Pold4 23 108 98 CCDS HistoryNCBI Gene:69745Re-query CCDS DB by CCDS ID:29424.1See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 29424.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000025773.4 ENSMUSP00000025773.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000025773.4Link to Ensembl Protein Viewer:ENSMUSP00000025773.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000025773Re-query CCDS DB by Protein ID:ENSMUSP00000025773
Original member Current member NCBI NM_027196.4 NP_081472.1 Accepted alive Link to Nucleotide Sequence:NM_027196.4Link to Protein Sequence:NP_081472.1Re-query CCDS DB by Nucleotide ID:NM_027196Re-query CCDS DB by Protein ID:NP_081472Link to BLAST:NP_081472.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_081472.1 107 Q9CWP8 107 100% 0 0

Chromosomal Locations for CCDS 29424.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 19 (NC_000085.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 4232092 4232188 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 4232463 4232552 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 4232748 4232859 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 4233214 4233238 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (324 nt):
ATGGGTCGGAAGCGGTTCATCACTGACTCCTATCCTGTTGTGAAGAAGAGGGAGGGGCCCCCTGGGCACA
GCAAGGGAGAGCTGGCACCCGAGCTAGGGGAAGACACCCAGTCCCTCAGCCAGGAGGAAACAGAGCTGGA
GCTGCTGAGGCAGTTTGACCTGGCCTGGCAGTATGGGCCTTGTACAGGTATCACAAGGCTGCAGCGCTGG
AGTCGGGCAGAGCAGATGGGCTTGAAGCCCCCCCTAGAGGTGTACCAAGTGTTGAAGGCACACCCTGAAG
ACCCTCACTTCCAATGCAGCCTGTGGCATCTCTACCCACTCTGA

Translation (107 aa):
MGRKRFITDSYPVVKKREGPPGHSKGELAPELGEDTQSLSQEETELELLRQFDLAWQYGPCTGITRLQRW
SRAEQMGLKPPLEVYQVLKAHPEDPHFQCSLWHLYPL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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