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Report for CCDS25459.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
25459.1 Public Mus musculus 11 Wnk4 23 108 98 CCDS HistoryNCBI Gene:69847Re-query CCDS DB by CCDS ID:25459.1See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 25459.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000103108.7 ENSMUSP00000099397.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000103108.7Link to Ensembl Protein Viewer:ENSMUSP00000099397.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000103108Re-query CCDS DB by Protein ID:ENSMUSP00000099397
Original member Current member NCBI NM_175638.3 NP_783569.1 Accepted alive Link to Nucleotide Sequence:NM_175638.3Link to Protein Sequence:NP_783569.1Re-query CCDS DB by Nucleotide ID:NM_175638Re-query CCDS DB by Protein ID:NP_783569Link to BLAST:NP_783569.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_783569.1 1222 Q80UE6 1222 100% 0 0

Chromosomal Locations for CCDS 25459.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 101260672 101261280 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 101262723 101262895 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 101263769 101263989 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 101264268 101264425 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 101265080 101265168 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 101265247 101265463 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 101268226 101268490 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 101268703 101268824 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 101269062 101269120 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 101269220 101269334 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 101269570 101269686 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 101273992 101274129 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 101274827 101274869 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 101274975 101275549 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 101275630 101275690 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 101275982 101276387 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 101276478 101276677 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 101276828 101276925 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 101277033 101277035 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3669 nt):
ATGCTAGCACCTCGAAATACGGAGACTGGGGTCCCCATGTCCCAAACCGAGGCTGACCTGGCTCTGCGGC
CATCTCCGGCTCTCACCTCTACGGGGCCGACCCGCCTGGGGCCACCTCCTCGCCGAGTGCGCCGCTTCTC
TGGGAAGGCTGAGCCTCGGCCGCGCTCTTCGAGACCTAGCCGCCGCAGCTCAGTCGATCTGGGACTGCTG
AGCTCCTGGTCTCAACCAGCCTCACTCCTTCCGGAACCCCCGGATCCTCCAGACTCCGCTGGCCCCACGA
GGAGCCCACCTTCAAGCTCTAAAGAACCCCCCGAGGGCACATGGATGGGGGCAGCTCCCGTGAAGGCTGT
GGACTCTGCATGTCCTGAGCTTACGGGATCTTCAGGAGGTCCAGGGTCCCGGGAGCCACCGAGGGTTCCT
GATGCTGCAGCCCGGGAACGGCGGCGGGAGCAGGAAGAAAAAGAGGACACAGAAACCCAGGCTGTGGCAA
CGTCTCCGGACGGCCGATACCTCAAGTTTGACATTGAGATTGGAAGAGGTTCCTTCAAGACCGTGTATCG
AGGGCTAGACACCGACACCACGGTAGAGGTGGCCTGGTGTGAGCTGCAGACCCGGAAACTCTCTCGGGCC
GAGCGGCAGCGTTTCTCCGAGGAAGTTGAGATGCTCAAGGGGCTGCAGCACCCCAACATCGTCCGCTTCT
ATGACTCCTGGAAGTCGGTGCTGAGGGGCCAGGTTTGCATCGTGCTGGTCACAGAACTCATGACCTCGGG
CACGCTCAAGACGTACCTGAGGCGGTTCCGCGAAATGAAGCCCCGAGTCCTTCAGCGCTGGAGTCGCCAG
ATTCTACGGGGACTTCATTTCCTTCATTCCCGAGTGCCCCCCATCCTGCACCGAGATCTCAAGTGTGACA
ACGTCTTCATTACTGGCCCTTCAGGCTCTGTCAAAATCGGAGACCTCGGACTGGCCACGCTCAAGCGCGC
CTCCTTTGCCAAGAGCGTCATTGGGACCCCGGAATTCATGGCTCCTGAGATGTACGAGGAAAAGTACGAC
GAGGCTGTGGATGTGTACGCCTTTGGCATGTGCATGCTGGAGATGGCTACGTCTGAGTATCCCTACTCCG
AGTGTCAGAATGCAGCACAAATCTACCGCAAGGTCACTTCGGGCACAAAGCCCAACAGCTTCTACAAGGT
GAAGATGCCAGAGGTGAAGGAGATCATTGAAGGCTGCATCCGCACGGATAAGAACGAGAGGTTCACCATC
CAGGATCTCCTGGCCCATGCGTTCTTCCGCGAGGAACGAGGTGTGCACGTGGAGCTGGCAGAGGAAGATG
ATGGAGAGAAGCCGGGCCTCAAGCTCTGGCTGCGCATGGAGGATGCGCGGCGCGGGGGGCGTCCACGAGA
CAACCAGGCCATCGAGTTCCTGTTTCAGCTCGGCCGGGACGCTGCGGAGGAGGTGGCTCAGGAGATGGTA
GCCTTGGGCTTAGTCTGTGAAGCTGACTACCAGCCAGTGGCCCGTGCAGTTCGAGAACGGGTTGCTGCTA
TCCAGCGGAAGCGGGAGAAGCTTCGAAAAGCTAGGGAATTGGAGGTTCTCCCACCAGACTCAGGACCTCC
TCCAGCAACTGTGTCTCTGGCTCCGGGTCCCCCCAGTGCCTTCCCCCCAGAGCCTGAGGAGCCAGAGGCT
GACCAGCATCAATCCTTCCTCTTCCGCCATGCCAGCTACTCATCAACTACATCTGATTGCGAGACTGATG
GCTACCTCAGTTCCTCCGGCTTCCTGGATGCCTCAGACCCTGCCCTTCAGCCCCCTGGGGGGTTACCATC
CAGCCCCGCTGAATCCCATCTCTGCTTGCCCTCGGGTTTTGCCTTGTCTATTCCACGGTCTGGCCCTGGC
AGTGACTTTTCTCCTGGGGATAGCTACGCCTCAGATGCGGCATCAGGCCTTAGTGACATGGGAGAAGGGG
GGCAAATGAGGAAAAATCCAGTGAAGACTCTTCGACGGAGACCTCGATCCCGGCTCCGGGTCACTAGTGT
CTCAGACCAGAGCGACAGAGTTGTCGAGTGTCAGCTGCAGACTCACAACAGCAAGATGGTGACGTTCCGA
TTTGATCTGGATGGGGACAGCCCAGAAGAAATTGCAGCTGCCATGGTATACAATGAGTTCATCCTGCCCT
CGGAGCGAGATGGATTCCTGAGCCGGATCCGGGAGATTATCCAGCGAGTGGAGACCCTGCTGAAGAGAGA
TGCTGGTCCCCCAGAGGCTGCTGAAGATGCCCTGAGCCCCCAGGAAGAGCCAGCAGCCCTGCCTGCCCTC
CCAGGCCCACCCAATGCAGAGCCCCAGAGAAGCATCTCCCCAGAACAGAGGAGCTGGGCAGCCTTCTCCA
CCTCTCCATCTTCTCCTGGCACCCCCTTGTCCCCTGGGGCCCCCTTTTCCCCTGGGACCCCTCCTGTCTT
CCCATGCCCCATCTTTCCTATCACTTCACCCTCATGCTATCCCTGCCCATTCTCCCAGGTCTCTTCAAAC
CCCTATCCACAGGCCCCCAGTTCCCTGCTTCCCTTATCCTCCAGTGCTTCTCAGGTTCCACTTCCATCTT
CCTCTCTTCCCATCAGCGCTCCCCTCCCATTCTCTCCTAGTTATCCCCAAGACCCTCTTAGCCCCACTTC
TCTTCCCGTCTGCCCCTCTCCTCCCTCTCTTCCCTCTACCACAGCAGCCCCTCTCCTCTCTCTGGCTAGT
GCCTTCTCTCTGGCTGTGATGACTGTGGCCCAGTCCCTGCTGTCCCCATCCCCTGGACTTCTTTCTCAGT
CTCCTCCAGCCCCTCCAGGTCCTCTGCCTAGCCTGCCCCTTTCCCTTGCTTCTTGTGACCAGGAGAGCCT
TTCGGCCCAAACAGCTGAGACAGAGAATGAGGCTTCCCGTAATCCTGCTCAGCCACTACTGGGTGATGCT
AGACTGGCACCTATATCTGAAGAGGGAAAGCCCCAGCTTGTTGGCCGTTTCCAAGTGACTTCATCTAAGG
AACCAGCAGAGCCTCCCCTGCAACCAGCATCCCCAACTCTCTCCAGATCCCTAAAGCTGCCAAGCCCTCC
GCTGACCTCAGAGAGCTCAGACACAGAGGACAGTGCTGCAGGAGGCCCAGAGACTAGGGAGGCTCTGGCA
GAGAGTGACCGTGCAGCCGAAGGCCTGGGGGTTGCGGTCGATGATGAAAAGGATGAAGGGAAGGAACCCC
TACTTGGAGGCAGTTCCCCAATCTTGAGCCATCCCAGCCCAGTGTGGATGAACTACTCCTACAGCAGCCT
GTGTCTGAGCAGTGAGGAGTCGGAGAGCAGCGGGGAAGACGAGGAATTCTGGGCTGAGCTGCAGAACCTT
CGGCAGAAGCACTTGTCGGAAGTGGAGGCACTACAGACACTACAGAAGAAGGAAATCGAGGACTTATACA
GCCGGCTTGGGAAACAGCCCCCACCTGGTATTGTAGCTCCAGCTGCTATGCTGTCCTGCCGCCAGCGCCG
CCTCTCGAAGGGCAGCTTTCCCACCTCCCGCCGCAACAGCCTGCAGCGCTCTGATCTCCCTGGTCCTGGC
ATCATGCGAAGGAACTCTCTGAGTGGCAGCAGCACCGGCTCCCAGGAGCAGCGGGCAAGCAAGGGGGTGA
CATTCGCCGGGGATATTGGCAGGATGTGA

Translation (1222 aa):
MLAPRNTETGVPMSQTEADLALRPSPALTSTGPTRLGPPPRRVRRFSGKAEPRPRSSRPSRRSSVDLGLL
SSWSQPASLLPEPPDPPDSAGPTRSPPSSSKEPPEGTWMGAAPVKAVDSACPELTGSSGGPGSREPPRVP
DAAARERRREQEEKEDTETQAVATSPDGRYLKFDIEIGRGSFKTVYRGLDTDTTVEVAWCELQTRKLSRA
ERQRFSEEVEMLKGLQHPNIVRFYDSWKSVLRGQVCIVLVTELMTSGTLKTYLRRFREMKPRVLQRWSRQ
ILRGLHFLHSRVPPILHRDLKCDNVFITGPSGSVKIGDLGLATLKRASFAKSVIGTPEFMAPEMYEEKYD
EAVDVYAFGMCMLEMATSEYPYSECQNAAQIYRKVTSGTKPNSFYKVKMPEVKEIIEGCIRTDKNERFTI
QDLLAHAFFREERGVHVELAEEDDGEKPGLKLWLRMEDARRGGRPRDNQAIEFLFQLGRDAAEEVAQEMV
ALGLVCEADYQPVARAVRERVAAIQRKREKLRKARELEVLPPDSGPPPATVSLAPGPPSAFPPEPEEPEA
DQHQSFLFRHASYSSTTSDCETDGYLSSSGFLDASDPALQPPGGLPSSPAESHLCLPSGFALSIPRSGPG
SDFSPGDSYASDAASGLSDMGEGGQMRKNPVKTLRRRPRSRLRVTSVSDQSDRVVECQLQTHNSKMVTFR
FDLDGDSPEEIAAAMVYNEFILPSERDGFLSRIREIIQRVETLLKRDAGPPEAAEDALSPQEEPAALPAL
PGPPNAEPQRSISPEQRSWAAFSTSPSSPGTPLSPGAPFSPGTPPVFPCPIFPITSPSCYPCPFSQVSSN
PYPQAPSSLLPLSSSASQVPLPSSSLPISAPLPFSPSYPQDPLSPTSLPVCPSPPSLPSTTAAPLLSLAS
AFSLAVMTVAQSLLSPSPGLLSQSPPAPPGPLPSLPLSLASCDQESLSAQTAETENEASRNPAQPLLGDA
RLAPISEEGKPQLVGRFQVTSSKEPAEPPLQPASPTLSRSLKLPSPPLTSESSDTEDSAAGGPETREALA
ESDRAAEGLGVAVDDEKDEGKEPLLGGSSPILSHPSPVWMNYSYSSLCLSSEESESSGEDEEFWAELQNL
RQKHLSEVEALQTLQKKEIEDLYSRLGKQPPPGIVAPAAMLSCRQRRLSKGSFPTSRRNSLQRSDLPGPG
IMRRNSLSGSSTGSQEQRASKGVTFAGDIGRM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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