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Report for CCDS22114.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22114.1 Public Mus musculus 8 Cdc16 23 108 98 CCDS HistoryNCBI Gene:69957Re-query CCDS DB by CCDS ID:22114.1See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 22114.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000043962.8 ENSMUSP00000047950.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000043962.8Link to Ensembl Protein Viewer:ENSMUSP00000047950.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000043962Re-query CCDS DB by Protein ID:ENSMUSP00000047950
Original member Current member NCBI NM_027276.3 NP_081552.2 Accepted alive Link to Nucleotide Sequence:NM_027276.3Link to Protein Sequence:NP_081552.2Re-query CCDS DB by Nucleotide ID:NM_027276Re-query CCDS DB by Protein ID:NP_081552Link to BLAST:NP_081552.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_081552.2 620 Q8R349 620 100% 0 0

Chromosomal Locations for CCDS 22114.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 13757807 13757854 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 13758998 13759052 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 13759140 13759237 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 13760530 13760568 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 13760977 13761117 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 13762851 13763010 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 13763820 13763911 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 13764569 13764702 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 13766418 13766497 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 13767538 13767587 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 13768561 13768634 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 13769377 13769502 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 13771298 13771450 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 13773341 13773404 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 13775708 13775769 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 13777472 13777607 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 13779228 13779318 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 13781372 13781631 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1863 nt):
ATGAACCTGGAGCCGCTGCGCAAACGCGTCCGGCAGTACCTGGACCAGCAACAGTATCAAAGTGCTCTGT
TTTGGGCAGACAAGGTAGCTTCACTCTCTCATGAGGAGCCCCAGGATGTTTATTGGTTGGCTCAGTGCCT
TTACCTCACAGCGCAGTACCACCGAGCAGCCCATGCGCTCCGGTCACGCAAGCTGGACAAATTGTATGAA
GCTTGCCGATACCTTGCAGCTAGATGCCACTATGCTGCAAAAGAGCACCAGCAGGCTCTGGACATCCTTG
ACATGGAGGAGCCAATTAACAGAAGGCTCTTTGAGAAATACCTGAAGGATGACAATGGCTCGAGAGACCC
TTCCAGTGACTGGGAGATGTCACAGTCTTCCATAAAGAGCTCGATTTGTCTCCTGAGAGGGAAGATCTAT
GATGCTTTAGATAATCGCACCCTGGCTACCTACAGTTACAAAGAGGCTCTGAAACTGGATGTCTACTGCT
TTGAAGCCTTTGACCTTTTGACATCACACCACATGCTGACAGCACAGGAAGAAAAAGAACTTCTGGACTC
CCTGCCTCTTAACAAGCTCTGTGCTGAAGAACAAGAGTTGCTGCGATTTGTATTTGAGAACAAATTAAAG
AAGTATAATAAGCCCAGTGAAACGGTCATTCCCGAGTCAGTGGACGGCTTGCAGGAGAATCTGGACGTGG
TAGTGTCTTTAGCTGAGAGACACTATTACAACTGTGATTTTAAGATGTGCTACAAGCTTACTTCTACAGT
GATGGAGAAAGATCCTTTCCATGCAAACTGTTTACCTGTGCACATAGGAACTCTTGTGGAGCTGAATAAA
GCGAATGAACTTTTCTATCTTTCTCACAAACTGGTGGATTTATATCCGAGTAATCCTGTGTCTTGGTTTG
CGGTGGGATGTTACTATCTCATGGTTGGTCATAAAAATGAGCATGCCAGAAGATATCTCAGCAAAGCTAC
CACGTTGGAGAAGACCTACGGTCCTGCCTGGATAGCCTACGGGCATTCCTTCGCTGTGGAGAGTGAGCAC
GACCAAGCAATGGCTGCTTACTTCACAGCAGCACAGCTGATGAAGGGGTGTCACTTGCCAATGCTATATA
TTGGATTAGAATATGGTCTGACCAATAACTCGAAACTGGCTGAGCGGTTCTTTGGCCAAGCTCTGAGCAT
CGCCCCAGAAGACCCATTTGTCATCCATGAGGTTGGAGTGGTTGCCTTTCAGAATGGAGAATGGAAAACA
GCAGAAAAATGGTTTCTCGATGCTTTGGAAAAAATTAAAGCAATTGGAAATGAGGTCACAGTTGACAAAT
GGGAACCTTTGTTGAACAACTTGGGGCATGTCTGCAGAAAACTTAAGAAATATGCTGAGGCTTTGGATTA
CCACAGGCAGGCACTGGTGCTAATCCCTCAGAACGCATCCACCTACTCTGCTATAGGGTACATCCACAGT
CTGATGGGCAACTTTGAAAACGCTGTGGACTATTTCCACACAGCTCTTGGTCTCAGGCGAGACGACACAT
TTTCTGTTACAATGCTTGGTCACTGCATTGAAATGTACATCGGGGATTCGGAAGCTTATATCGGAGCAGA
CATTAAAGACAAATTAAAGTGCTATGACTTCGATGTGCATACAATGAAAACACTAAAAAACATCATTTCG
CCTCCATGGGATTTCAGGGACTTTGAAGTAGAAAAGCAGAACACAGAGGAAGCGGGACTTGCACCTCTGC
AAAACTCCACTAAAGCTCCAGAGTCCAGACCTAACTTGGAAGAGACTTTTGAAATTGAAATGAACGAAAG
TGACATGATGCTAGAGACGTCTATGTCAGACCACAGCACATAG

Translation (620 aa):
MNLEPLRKRVRQYLDQQQYQSALFWADKVASLSHEEPQDVYWLAQCLYLTAQYHRAAHALRSRKLDKLYE
ACRYLAARCHYAAKEHQQALDILDMEEPINRRLFEKYLKDDNGSRDPSSDWEMSQSSIKSSICLLRGKIY
DALDNRTLATYSYKEALKLDVYCFEAFDLLTSHHMLTAQEEKELLDSLPLNKLCAEEQELLRFVFENKLK
KYNKPSETVIPESVDGLQENLDVVVSLAERHYYNCDFKMCYKLTSTVMEKDPFHANCLPVHIGTLVELNK
ANELFYLSHKLVDLYPSNPVSWFAVGCYYLMVGHKNEHARRYLSKATTLEKTYGPAWIAYGHSFAVESEH
DQAMAAYFTAAQLMKGCHLPMLYIGLEYGLTNNSKLAERFFGQALSIAPEDPFVIHEVGVVAFQNGEWKT
AEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVCRKLKKYAEALDYHRQALVLIPQNASTYSAIGYIHS
LMGNFENAVDYFHTALGLRRDDTFSVTMLGHCIEMYIGDSEAYIGADIKDKLKCYDFDVHTMKTLKNIIS
PPWDFRDFEVEKQNTEEAGLAPLQNSTKAPESRPNLEETFEIEMNESDMMLETSMSDHST


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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