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Report for CCDS51500.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
51500.1 Public Mus musculus 5 Adgra3 23 108 98 CCDS HistoryNCBI Gene:70693Re-query CCDS DB by CCDS ID:51500.1See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 51500.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000030971.6 ENSMUSP00000030971.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000030971.6Link to Ensembl Protein Viewer:ENSMUSP00000030971.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000030971Re-query CCDS DB by Protein ID:ENSMUSP00000030971
Original member Current member NCBI NM_133911.1 NP_598672.1 Accepted alive Link to Nucleotide Sequence:NM_133911.1Link to Protein Sequence:NP_598672.1Re-query CCDS DB by Nucleotide ID:NM_133911Re-query CCDS DB by Protein ID:NP_598672Link to BLAST:NP_598672.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_598672.1 1310 Q7TT36 1310 100% 0 0

Chromosomal Locations for CCDS 51500.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 5 (NC_000071.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 49960272 49961514 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 49961648 49961743 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 49963691 49963836 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 49970690 49970813 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 49971951 49972075 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 49978943 49979151 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 49979360 49979573 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 49987474 49987677 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 49990125 49990286 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 49998215 49998370 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 49999133 49999334 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 50001855 50002019 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 50006749 50006962 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 50009336 50009496 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 50011491 50011562 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 50013393 50013464 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 50016827 50016898 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 50025707 50025778 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 50058552 50058775 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3933 nt):
ATGGAGCCGCCGCCGCCGCTGCTGCTGCTGCCGCTGGCGCTGCTCGCTCTGCTGTGGGGAGGAGAGCGCG
GGGCCGCGGCGCTGCCCGCGGGCTGCAAGCACGACGGTCGGGCCCGGGGTACCGGCCGAGCGGCCGCCGC
CGCCGAGGGGAAGGTGGTGTGCAGCAGCCTGGAGCTCGCGCAGGTTCTGCCCCCGGACACGCTGCCCAAC
CGCACGGTCACCCTGATTTTAAGCAACAACAAGATCTCCGAGCTGAAGAATGGTTCATTTTCTGGCTTAA
GTCTCCTCGAAAGACTGGACCTCCGGAACAACCTTATTAGTAGGATAGCCCCAGGTGCCTTTTGGGGACT
GTCTTCACTGAAGAGATTGGACCTGACGAACAACCGAATAGGTTGTCTGAATGCAGATGTATTTCGAGGA
CTCACCAATCTGGTTCGGCTAAACCTTTCAGGGAATCTGTTTACTTCACTGTCTCAAGGAACTTTTGATT
ATCTTGGCTCGTTGCGGTCTTTAGAATTTCAGACTGAGTACCTTCTGTGTGACTGTAACATTCTGTGGAT
GCATCGCTGGGTAAAGGAGAGAAACATCACTGTGCGAGACACCAGGTGTGTTTATCCCAAGTCACTGCAG
GCCCAGCCTGTCACGGGGGTGAAACAGGAGCTCCTCACTTGCGATCCTCCCCTTGAACTGCCGTCCTTCT
ACATGACTCCGTCGCACCGCCAGGTTGTGTTTGAAGGAGACAGCCTTCCCTTCCAGTGCATGGCTTCCTA
TATAGATCAGGACATGCAAGTGCTGTGGTATCAGGATGGGCGCATTGTTGAGACCGATGAGTCCCAAGGG
ATCTTTGTGGAGAAAAGCATGATTCACAATTGCTCCTTGATCGCCAGTGCCCTAACCATTTCTAATATTC
AAGCTGGATCTACTGGAAATTGGGGCTGTCATGTTCAGACGAAACGTGGGAATAACACAAGAACTGTTGA
CATTGTGGTATTAGAAAGCTCCGCCCAATACTGTCCACCAGAGAGGGTTGTGAACAACAAAGGTGATTTC
AGATGGCCCAGGACACTGGCGGGCATCACAGCATATCTCCAGTGTACCCGGAACACCCACAGCAGTGGGA
TCTACCCTGGAAGCGCACAGGATGAAAGGAAGGCGTGGCGCCGATGCGACAGAGGTGGCTTTTGGGCAGA
TGATGATTATTCTAGGTGCCAGTATGCAAATGACGTCACTAGAGTCCTGTATATGTTTAATCAGATGCCC
CTCAACCTTACAAATGCGGTCGCTACAGCTCGGCAGCTGCTGGCTTACACAGTGGAGGCCGCCAACTTCT
CTGACAAAATGGACGTTATATTTGTGGCTGAAATGATAGAAAAGTTTGGAAGATTTACCAGAGAGGAAAA
ATCAAAAGAGCTTGGTGATGTAATGGTCGATGTGGCAAGCAACATCATGTTGGCTGATGAGCGGGTCCTG
TGGCTGGCACAGAGGGAAGCAAAGGCCTGCAGTCGGATTGTCCAGTGCCTGCAGCGCATTGCCACACATC
GCCTGGCCAGTGGGGCCCACGTGTACTCCACGTACTCGCCCAACATTGCTCTGGAGGCTTACGTCATCAA
GGCTGCTGGCTTCACAGGAATGACCTGCTCCGTGTTCCAGAAGGTGGCTGCCTCCGACCGTGCAGGTCTT
TCTGACTATGGGCGAAGGGACCCGGATGGAAACCTGGATAAGCAGCTGAGCTTCAAATGCAATGTCTCCA
GCACCTTCTCAAGCCTGGCCCTGAAGAACACCATCATGGAGGCCTCCATTCAGCTTCCTTCCTCCCTTTT
GTCACCAAAACACAAGCGAGAAGCCCGAGCGGCGGATGACGCCCTCTATAAGCTCCAGCTCATTGCCTTC
CGCAACGGAAAGCTTTTTCCAGCCACAGGAAATTCAACAAAGTTGGCAGACGATGGCAAGCGGCGGACAG
TAGTGACCCCTGTGATCCTCACGAAAATAGATGGTGCAACCGTAGATACCCACCACATCCCTGTTAATGT
GACGCTGCGCCGAATTGCCCACGGAGCAGATGCGGTTGCAGCGCAGTGGGACTTTGATTTGCTGAACGGA
CAAGGAGGCTGGAAGTCAGATGGGTGCTGTATACTCTACTCGGATGAGAACATCACCACCATTCAGTGCG
GCTCCCTGGGCAACTATGCTGTGCTAATGGATCTGACTGGGACAGAGTTGTACACCCCAGCAGCCAGTCT
CCTGCACCCTGTGGTTTACACCACTGCCATCACTCTCCTCTTGTGTCTCTTGGCTGTTATCATCAGTTAC
ATGTACCACCACAGCTTGATCCGAATCAGTCTCAAGAGCTGGCACATGCTTGTGAACCTGTGCTTTCACA
TTCTCCTGACCTGCGTGGTGTTTGTGGGAGGAATAACCCAGACCAGAAATGCCAGCGTCTGTCAAGCAGT
TGGGATCATTCTTCATTATTCTACCCTTGCCACGGTATTGTGGGTTGGAGTCACTGCTAGAAATATCTAT
AAACAAGTCACCAAGAAAGCCAAGAGATGCCAGGATCCAGATGAGCCACCCGCTCCTCCACGACCGATGC
TGAGGTTCTACCTGATTGGTGGTGGGATCCCCATCATAGTGTGTGGTATCACCGCGGCAGCAAACATCAA
GAACTATGGCAGTCGGCCCAGTGCACCGTATTGCTGGATGGCCTGGGAACCGTCCTTGGGAGCCTTCTAC
GGACCTGCCAGCTTCATCACTTTTGTAAACTGTATGTATTTTCTAAGCATATTTATTCAGTTGAAAAGAC
ACCCTGAGCGCAAATATGAGCTCAAGGAGCCGACAGAAGAGCAGCAGAGATTGGCAGCCAATGAAAATGG
TGAAATCAACCATCAGGACTCCATGTCTCTGTCTCTCATCTCTACGTCCACGTTGGAGAACGAGCACAGT
TTTCAGTCTCAGCTTCTGGGCGCCAGCCTTACTTTGCTTTTGTATGTCATCTTGTGGATGTTTGGGGCCA
TGGCTGTTTCTCTGTATTACCCTCTGGACTTGGTTTTTAGCTTCTTCTTCGGAGCCACTTGTTTAAGCTT
CAGTGCTTTCATGATGGTGCACCACTGCATCAACAGGGAGGACGTGAGACTTGCGTGGATCATGATGTGC
TGCCCAGGGCGGAGCTCGTACTCCGTGCAAGTCAACGTCCAACCTCCCAACTCAAGCGCCACTAATGGAG
AGGCTCCAAAGTGCACCAATAGCAGCGCAGAGTCTTCGTGCACGAACAAAAGCGCATCGAGCTTCAAAAA
CTCTTCCCAGGGCTGCAAGCTGACAAACTTGCAGGCTGCTGCGGCACAGTACCACAGCAATGCCCTACCT
GTGAATGCCACGCCGCAGCTTGATAACAGTCTGACCGAACACTCGATGGACAACGATATTAAAATGCATG
TGGCTCCTTTAGACGTGCAGTTTCGAACAAACGTGCACCCAAGCCGCCACCACAAAAACCGAAGTAAAGG
ACACCGGGCCAGCAGGCTCACAGTCCTGCGAGAGTATGCCTATGACGTCCCAACAAGTGTGGAAGGAAGC
GTGCAGAATGGCTTACCTAAAAGCCGGCCAGGCAGCAATGAAGGACATTCAAGGAGTAGGAGAGCTTATT
TAGCCTACAGAGAGAGACAGTACAACCCACCCCAACAAGACAGCAGTGATGCTTGTAGCACACTTCCCAA
AAGTAGCCGAAATGTTGAAAAGCCTGTTTCAACTAGTAGTAAGAAAGATGCACCAAGGAAGCCAGCTGCA
GCCGACCTTGAAAGTCAGCAGAAATCTTACGGCCTGAACTTGGCTGTTCAGAATGGACCAGTTAAAAGCA
ATGGGCAGGAAGGACCCTTGCTAGCTACCGACGTCACTGGTAATGTTAGGACTGGGTTATGGAAACACGA
AACAACTGTGTAG

Translation (1310 aa):
MEPPPPLLLLPLALLALLWGGERGAAALPAGCKHDGRARGTGRAAAAAEGKVVCSSLELAQVLPPDTLPN
RTVTLILSNNKISELKNGSFSGLSLLERLDLRNNLISRIAPGAFWGLSSLKRLDLTNNRIGCLNADVFRG
LTNLVRLNLSGNLFTSLSQGTFDYLGSLRSLEFQTEYLLCDCNILWMHRWVKERNITVRDTRCVYPKSLQ
AQPVTGVKQELLTCDPPLELPSFYMTPSHRQVVFEGDSLPFQCMASYIDQDMQVLWYQDGRIVETDESQG
IFVEKSMIHNCSLIASALTISNIQAGSTGNWGCHVQTKRGNNTRTVDIVVLESSAQYCPPERVVNNKGDF
RWPRTLAGITAYLQCTRNTHSSGIYPGSAQDERKAWRRCDRGGFWADDDYSRCQYANDVTRVLYMFNQMP
LNLTNAVATARQLLAYTVEAANFSDKMDVIFVAEMIEKFGRFTREEKSKELGDVMVDVASNIMLADERVL
WLAQREAKACSRIVQCLQRIATHRLASGAHVYSTYSPNIALEAYVIKAAGFTGMTCSVFQKVAASDRAGL
SDYGRRDPDGNLDKQLSFKCNVSSTFSSLALKNTIMEASIQLPSSLLSPKHKREARAADDALYKLQLIAF
RNGKLFPATGNSTKLADDGKRRTVVTPVILTKIDGATVDTHHIPVNVTLRRIAHGADAVAAQWDFDLLNG
QGGWKSDGCCILYSDENITTIQCGSLGNYAVLMDLTGTELYTPAASLLHPVVYTTAITLLLCLLAVIISY
MYHHSLIRISLKSWHMLVNLCFHILLTCVVFVGGITQTRNASVCQAVGIILHYSTLATVLWVGVTARNIY
KQVTKKAKRCQDPDEPPAPPRPMLRFYLIGGGIPIIVCGITAAANIKNYGSRPSAPYCWMAWEPSLGAFY
GPASFITFVNCMYFLSIFIQLKRHPERKYELKEPTEEQQRLAANENGEINHQDSMSLSLISTSTLENEHS
FQSQLLGASLTLLLYVILWMFGAMAVSLYYPLDLVFSFFFGATCLSFSAFMMVHHCINREDVRLAWIMMC
CPGRSSYSVQVNVQPPNSSATNGEAPKCTNSSAESSCTNKSASSFKNSSQGCKLTNLQAAAAQYHSNALP
VNATPQLDNSLTEHSMDNDIKMHVAPLDVQFRTNVHPSRHHKNRSKGHRASRLTVLREYAYDVPTSVEGS
VQNGLPKSRPGSNEGHSRSRRAYLAYRERQYNPPQQDSSDACSTLPKSSRNVEKPVSTSSKKDAPRKPAA
ADLESQQKSYGLNLAVQNGPVKSNGQEGPLLATDVTGNVRTGLWKHETTV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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