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Report for CCDS40527.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
40527.1 Public Mus musculus 9 Ddi1 23 108 98 CCDS HistoryNCBI Gene:71829Re-query CCDS DB by CCDS ID:40527.1See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 40527.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000051706.5 ENSMUSP00000053223.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000051706.5Link to Ensembl Protein Viewer:ENSMUSP00000053223.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000051706Re-query CCDS DB by Protein ID:ENSMUSP00000053223
Original member Current member NCBI NM_027942.1 NP_082218.1 Accepted alive Link to Nucleotide Sequence:NM_027942.1Link to Protein Sequence:NP_082218.1Re-query CCDS DB by Nucleotide ID:NM_027942Re-query CCDS DB by Protein ID:NP_082218Link to BLAST:NP_082218.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_082218.1 408 Q9DAF3 408 100% 0 0

Chromosomal Locations for CCDS 40527.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 6265141 6266367 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1227 nt):
ATGCTGATCACTGTGTATTGTGTGCGTAGGGACCTCACAGAGGTAACCTTTTCCCTCCAGGTCAACCCTG
ACTTTGAGCTCTCAAACTTCAGAGTCCTCTGTGAGCTTGAGTCTGGTGTGCCTGCTGAGGAGGCCCAGAT
CGTTTACATGGAACAGCTCCTCACAGATGACCACTGCTCCCTGGGCTCCTATGGACTCAAAGATGGTGAC
ATGGTTGTACTTCTTCAGAAGGATAATGTTGGACTTCGGACTCCAGGAAGGACTCCAAACCATCCTCGAG
CAGATTTCACTGGGTCTGGGTCGGCCGTGCCTGGAACATCAAGTTCCCGACACCCGCATCAGCATCAACA
CCATTATCACCATCATCAACGTATACCATCAACACAGCAAGCCCACGGATTAGCCTCTGGAGAGAATATG
ACCTTTGCTCAGGAACTCGACAGCCCTGCCCTGATTCGAAGCATGCTGCTTTCCAACCCCCATGATCTGT
CCCTGTTGAAGGAACGGAATCCTGCTTTGGCTGAAGCTCTGCTTAGTGGAAACCTTGAGACATTTTCTCA
GGTCCTGATGGAGCAGCAGAGAGAAAGGACCTTGAGAGAGCAAGAGATGTTTCGTCTTTACTCTACTAAC
CCATTTGATCAGGAAACTCAGGCTAGAATAGAAGAAGAAATCCGACAACAGAATATTGAAGAAAATATGA
ACATAGCTATGGAAGAGGCTCCGGAGAGTTTTGGACAAGTCGCTATGCTCTATATTAACTGCAAAGTGAA
TGGGCATCCTTTAAAGGCTTTTGTTGACTCTGGTGCCCAGATGACTATCATGAGCCAAGCTTGTGCTGAG
AGATGTAATATTATGAGACTGGTAGACCGACGGTGGGGTGGGGTTGCTAAGGGAGTAGGCACACAGAGGA
TTATGGGCCGCGTTCATCTGGCTCAGATTCAAATTGAAGGTGATTTCTTACAGTGCTCTTTCTCTATACT
TGAAGAGCAGCCCATGGATATCCTTCTAGGGCTTGATATGCTCAGGAGGCACCAGTGTTCCATCGACCTA
AAGAAAAATGTGCTGGTGATTGGCACTACCGGCTCACAGACTCACTTCCTTCCTGAAGGAGAGTTGCCCT
TGTGTGCTAAACTGTTGAGTGGAACTGTACAAGAAGAGTCTTCAGACAGGGAAGTAGGAGGTACTATCAA
ACACCCTGTCAAGGGTCCTGGACGTAAAAAGCATTGA

Translation (408 aa):
MLITVYCVRRDLTEVTFSLQVNPDFELSNFRVLCELESGVPAEEAQIVYMEQLLTDDHCSLGSYGLKDGD
MVVLLQKDNVGLRTPGRTPNHPRADFTGSGSAVPGTSSSRHPHQHQHHYHHHQRIPSTQQAHGLASGENM
TFAQELDSPALIRSMLLSNPHDLSLLKERNPALAEALLSGNLETFSQVLMEQQRERTLREQEMFRLYSTN
PFDQETQARIEEEIRQQNIEENMNIAMEEAPESFGQVAMLYINCKVNGHPLKAFVDSGAQMTIMSQACAE
RCNIMRLVDRRWGGVAKGVGTQRIMGRVHLAQIQIEGDFLQCSFSILEEQPMDILLGLDMLRRHQCSIDL
KKNVLVIGTTGSQTHFLPEGELPLCAKLLSGTVQEESSDREVGGTIKHPVKGPGRKKH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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