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Report for CCDS21793.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21793.1 Public Mus musculus 7 Anks4b 23 108 98 CCDS HistoryNCBI Gene:72074Re-query CCDS DB by CCDS ID:21793.1See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21793.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000033201.6 ENSMUSP00000033201.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000033201.6Link to Ensembl Protein Viewer:ENSMUSP00000033201.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000033201Re-query CCDS DB by Protein ID:ENSMUSP00000033201
Original member Current member NCBI NM_028085.2 NP_082361.2 Accepted alive Link to Nucleotide Sequence:NM_028085.2Link to Protein Sequence:NP_082361.2Re-query CCDS DB by Nucleotide ID:NM_028085Re-query CCDS DB by Protein ID:NP_082361Link to BLAST:NP_082361.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_082361.2 423 Q8K3X6 423 100% 0 0

Chromosomal Locations for CCDS 21793.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 120173919 120174082 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 120181912 120183019 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1272 nt):
ATGTCTACCCGCTATCACCAAGCAGCGAGTGACAGCTACCTGGAACTTCTGAAGGAGGCCACCAAGCGTG
ATCTGAATCTCTCAGATGAGGATGGCATGACACCCACTCTCCTGGCAGCCTACCACGGCAACCTCGAGGC
CCTAGAAATAATCTGCAGTAGAGGTGGAGACCCTGATAAGTGTGACATCTGGGGGAACACTCCTCTACAT
TATGCAGCCTCCAATGGCCACACTCATTGCATCTCATTTCTAGTCAATTTTGGTGCCAACATCTTTGCCC
TGGATAATGACTTGAAGTCTCCACTGGATGCTGCTGCTAGTAGGGAGCAGAAAGAATGTGTTGCTCTCCT
GGACAAGGCTGCCACTGTGCAGAACACCATGAACCCCAAAAGAGTCACCAGACTGAAGGAACAGGCTCTG
AAGAATGCCAGGAAGCAGATGAAAGAGTGCGAACGGCTTCAGGAGAGGCACCAAAACAAGATGGCGCGCA
CCTATAGCAAGGAGGACTCAGGGACGATTTCTTCTTCCCATAGTACCTTGTCTAGGTCGTTTCTTTCAAC
TACTTCAGCTGGTAGATTTGGATCACTGTCCAAAGGCATTAAAGATACCTTCAAGATAAAATCTAAGAAG
AACAAAGATACAACAGAACAGCTAGAGAAGGACGGAAGAAGTGGGCAGAGGCCTGTGATGGAAGTGTTCA
GAGAGGAGGAAGAAGACTCATTTCCAAAGGACTTCAAAGAGAAGCTCCATTTCTCAGTAGAAGAAGATGA
TGATGTACAACATGAGTCTATTCTCAACCGTCCGGGTCTAGGAAGTATTGTTTTTAGTAGAAACAGAGTA
CTGGACTTTGAGGACATCTCTGACAGCAAGAGGGAGTTGGGTTTTAAAATGCCCAGTGAGCTATTCCAAA
GACAAGGAGCAGCAGGAACAGTTGAAGAAGAAGAAGAGGAGGAGGAGGAGGAAGAGGAGGAGAAGAGAGA
GGCAAACGGCACTGCAGGTGATCTTCCTTGGGATGAAGAAGAAGTAGAATGGGAGGAAGATGCAGTTGAT
GCTACTCCACTGGAAGTGTTCTTGCAGTCTCAGCACCTGGAGGAATTCCTTCCCATTTTTATGAGAGAAC
AGATTGATCTAGAGGCTCTGCTGCTTTGCTCTGATGAGGACCTTCAGAATATCCACATGCAGCTGGGCCC
CAGGAAGAAAGTCCTTAGTGCCATAGACAAAAGGAAGCAGGTGCTCCAACAGCCTGGGCAGTTGGTTGAC
ACCAGCCTCTAA

Translation (423 aa):
MSTRYHQAASDSYLELLKEATKRDLNLSDEDGMTPTLLAAYHGNLEALEIICSRGGDPDKCDIWGNTPLH
YAASNGHTHCISFLVNFGANIFALDNDLKSPLDAAASREQKECVALLDKAATVQNTMNPKRVTRLKEQAL
KNARKQMKECERLQERHQNKMARTYSKEDSGTISSSHSTLSRSFLSTTSAGRFGSLSKGIKDTFKIKSKK
NKDTTEQLEKDGRSGQRPVMEVFREEEEDSFPKDFKEKLHFSVEEDDDVQHESILNRPGLGSIVFSRNRV
LDFEDISDSKRELGFKMPSELFQRQGAAGTVEEEEEEEEEEEEEKREANGTAGDLPWDEEEVEWEEDAVD
ATPLEVFLQSQHLEEFLPIFMREQIDLEALLLCSDEDLQNIHMQLGPRKKVLSAIDKRKQVLQQPGQLVD
TSL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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