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Report for CCDS92568.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
92568.1 Public Homo sapiens 19 CIST1 24 110 108 CCDS HistoryNCBI Gene:729966Re-query CCDS DB by CCDS ID:92568.1See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 92568.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000643046.1 ENSP00000496487.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000643046.1Link to Ensembl Protein Viewer:ENSP00000496487.1Re-query CCDS DB by Nucleotide ID:ENST00000643046Re-query CCDS DB by Protein ID:ENSP00000496487
Original member NCBI NM_001396036.1 NP_001382965.1 Updated not alive Link to Nucleotide Sequence:NM_001396036.1Link to Protein Sequence:NP_001382965.1Re-query CCDS DB by Nucleotide ID:NM_001396036Re-query CCDS DB by Protein ID:NP_001382965
Current member NCBI NM_001396036.2 NP_001382965.1 Accepted alive Link to Nucleotide Sequence:NM_001396036.2Link to Protein Sequence:NP_001382965.1Re-query CCDS DB by Nucleotide ID:NM_001396036Re-query CCDS DB by Protein ID:NP_001382965Link to BLAST:NP_001382965.1

Chromosomal Locations for CCDS 92568.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 18250130 18250177 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 18250312 18250472 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 18252064 18252471 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 18255220 18255307 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (705 nt):
ATGGCGTGCCCCCAGCTGCCGCCACTTCTGCTTTTGGTGCTGGTGGTGCTGCTGAAAGCTGGTGTGAATT
ACAATACTCCCTTTACAGATATTGTGACCTCAGAGAACAGTATGGAGACATCACCTGTCAGCTCTCTGAT
TTCTTCTCCCTTCGCCCACAGCACCCACAGTTCAGGGGAACCCCCCAAATCCTACTCCAGCACCATGAGT
TTGGAGACAGACTCCATAACCCACCTCAGCCCCTCAAGTTCAGGGGCAACCCCTACCATCCAGCCGAGCC
CCAGCTCCACAGATTCAAGGATGATACCCTCCTCCCCACAACCAGAGACAATCACGCACCCTAGTTCTGG
CTCCCCCAGTGCAGAGCTCACCCCCTCTTCCCATTCCACCCTCCCCAGTTCCGAATCCCTGACCCCGCAC
TGGAGCCCCACTTCCCACAGCCCCGGAACGGAGCCCTTGACCTCCACTGACCAGACCTTGGAGCCCCCTG
GCCCAGCTCCAGGTGACACTGGGCCCCGTGAGTTACACAGGAACCCGAGTGTGGTGGTGGTCGTGTGTTT
GCTGGTGTCTCTTTTGCTCATCGGGTCTGTGGTCATGGCTGTGAGATTCTGTCACCGGAATGAGTCCAAG
TTTGAGAACCTGGACGAGGTGTCCATGGGATCCGTGAATGACAGATTGTCCTTTGCCCACCACCTCCAGG
AGTGA

Translation (234 aa):
MACPQLPPLLLLVLVVLLKAGVNYNTPFTDIVTSENSMETSPVSSLISSPFAHSTHSSGEPPKSYSSTMS
LETDSITHLSPSSSGATPTIQPSPSSTDSRMIPSSPQPETITHPSSGSPSAELTPSSHSTLPSSESLTPH
WSPTSHSPGTEPLTSTDQTLEPPGPAPGDTGPRELHRNPSVVVVVCLLVSLLLIGSVVMAVRFCHRNESK
FENLDEVSMGSVNDRLSFAHHLQE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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