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Report for CCDS25913.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
25913.1 Public Mus musculus 12 Fam177a 23 108 98 CCDS HistoryNCBI Gene:73385Re-query CCDS DB by CCDS ID:25913.1See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 25913.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000177768.2 ENSMUSP00000137299.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000177768.2Link to Ensembl Protein Viewer:ENSMUSP00000137299.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000177768Re-query CCDS DB by Protein ID:ENSMUSP00000137299
Original member Current member NCBI NM_028527.2 NP_082803.1 Accepted alive Link to Nucleotide Sequence:NM_028527.2Link to Protein Sequence:NP_082803.1Re-query CCDS DB by Nucleotide ID:NM_028527Re-query CCDS DB by Protein ID:NP_082803Link to BLAST:NP_082803.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_082803.1 207 Q8BR63 207 100% 0 0

Chromosomal Locations for CCDS 25913.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 12 (NC_000078.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 55124642 55124722 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 55130616 55130789 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 55135668 55135734 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 55137118 55137215 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 55138776 55138979 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (624 nt):
ATGGAGCGTGAGTCGGGATGCGCGGCGGCGGGAGAGACCGAGGCAGCGGCCGCCACGGCGTTCCGAGACG
CGACACGGCAGATAAGTAATGAAAGAGGATTTGAGAATGTAGAACTGGGCGTCATGGGGAAGAAGAAGAA
AGTCCCGAGGAGGGTCATCCACTTTGTCAGTGGAGAGACAATGGAGGAGTACAGCACCGACGAGGACGAG
GTGGACGGCCTGGACAAGAAGGACGTGCTGCCCACTGTCGACCCGACAAAACTTACCTGGGGCCCCTACC
TATGGTTTTACATGCTGCGGGCCGCCACATCAACCCTCTCAGTGTGTGACTTTCTTGGAGAGAAGATTGC
GTCAGTTTTGGGCATCAGCACCCCAAAATACCAGTACGCCATTGATGAGTATTACCGGATGAAGAAGGAG
GAGGAGGAGGAGGAAGAAGAAAATAGGATGTCAGAAGAAGCAGAAAGACAATACCAACAAAACAAGCTGC
AGGCCGATTCCATTGTACAGACAGACCAACCAGAAACAGTGTCGTCCAGCTTTGTAAATATTAATTTTGA
AATGGAGGAAGACTGTGAAGCAATTAAGGAAAACAAACAGCGTCCAGTCTCTGTCCCACCATAG

Translation (207 aa):
MERESGCAAAGETEAAAATAFRDATRQISNERGFENVELGVMGKKKKVPRRVIHFVSGETMEEYSTDEDE
VDGLDKKDVLPTVDPTKLTWGPYLWFYMLRAATSTLSVCDFLGEKIASVLGISTPKYQYAIDEYYRMKKE
EEEEEEENRMSEEAERQYQQNKLQADSIVQTDQPETVSSSFVNINFEMEEDCEAIKENKQRPVSVPP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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