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Report for CCDS48741.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
48741.1 Public Mus musculus 11 Morc2a 23 108 98 CCDS HistoryNCBI Gene:74522Re-query CCDS DB by CCDS ID:48741.1See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 48741.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000093389.8 ENSMUSP00000091087.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000093389.8Link to Ensembl Protein Viewer:ENSMUSP00000091087.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000093389Re-query CCDS DB by Protein ID:ENSMUSP00000091087
Original member Current member EBI ENSMUST00000096441.4 ENSMUSP00000094176.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000096441.4Link to Ensembl Protein Viewer:ENSMUSP00000094176.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000096441Re-query CCDS DB by Protein ID:ENSMUSP00000094176
Original member Current member NCBI NM_001159288.2 NP_001152760.1 Accepted alive Link to Nucleotide Sequence:NM_001159288.2Link to Protein Sequence:NP_001152760.1Re-query CCDS DB by Nucleotide ID:NM_001159288Re-query CCDS DB by Protein ID:NP_001152760Link to BLAST:NP_001152760.1
Original member Current member NCBI NM_001363202.1 NP_001350131.1 Accepted alive Link to Nucleotide Sequence:NM_001363202.1Link to Protein Sequence:NP_001350131.1Re-query CCDS DB by Nucleotide ID:NM_001363202Re-query CCDS DB by Protein ID:NP_001350131Link to BLAST:NP_001350131.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001152760.1 1030 Q69ZX6 1030 100% 0 0
NP_001350131.1 1030 Q69ZX6 1030 100% 0 0

Chromosomal Locations for CCDS 48741.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 3650380 3650447 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 3658672 3658725 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 3661829 3661863 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 3668771 3668839 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 3669329 3669419 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 3672266 3672374 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 3675828 3675987 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 3676104 3676215 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 3676642 3676767 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 3677403 3677482 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 3678227 3678309 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 3678536 3678621 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 3679656 3679796 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 3679880 3680034 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 3680175 3680303 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 3680783 3680888 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 3681675 3681807 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 3683545 3683616 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 3683699 3684076 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 3684614 3684745 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 3684838 3684892 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 3685385 3685526 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 3685658 3685882 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 3685976 3686069 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 3688111 3688299 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 3689035 3689103 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3093 nt):
ATGGCCTTCACCAATTACAGCAGTCTCAACCGAGCTCAACTAACCTTTGAATATCTCCACACAAATTCAA
CCACTCATGAATTCTTATTTGGTGCTCTTGCTGAACTGGTTGATAATGCAAGAGATGCTGATGCTACCAG
AATAGACATTTATGCTGAGAGGCGGGAGGACCTTCGAGGAGGATTTATGCTTTGCTTTTTGGATGATGGA
GCAGGAATGGATCCAAGTGATGCTGCTAGTGTGATCCAGTTTGGGAAGTCAGCCAAAAGAACTCCTGAGT
CCACTCAAATTGGGCAGTATGGCAATGGATTAAAATCGGGCTCAATGCGGATTGGGAAGGATTTTATCCT
TTTCACTAAGAAGGAAGATACCATGACCTGCCTCTTCTTGTCTCGCACCTTTCATGAGGAAGAAGGCATT
GATGAAGTAATTGTCCCATTGCCCACCTGGAATGCTCGAACACGGGAACCTATCACAGACAATGTGGAGA
AGTTTGCCATTGAGACAGAGCTTGTCTACAAATACTCTCCCTTCCACACTGAGGAGCAAGTGATGAACCA
GTTCATGAAGATTCCTGGGAATAGTGGAACACTGGTGATCATCTTTAATCTCAAGCTCATGGATAATGGA
GAGCCGGAACTAGACATAATCTCAAATCCAAAAGATATCCAGATGGCAGAAACCTCGCCAGAGGGCACGA
AGCCAGAGCGACGCTCCTTCCGAGCCTATGCTGCTGTACTCTATATTGATCCCCGGATGAGGATCTTCAT
CCATGGACACAAGGTGCAGACCAAGAGACTCTCCTGCTGCCTATATAAGCCCAGGATGTACAAGTATACA
TCAAGTCGTTTCAAGACTCGGGCAGAACAGGAAGTGAAGAAAGCAGAGCATGTAGCACGGATTGCTGAAG
AGAAGGCCCGGGAGGCAGAGAGCAAAGCTCGTACTTTAGAAGTACGCATGGGTGGAGACCTGACACGGGA
CTCCAGGGTGATGTTGCGGCAGGTCCAGAATACAGCCATCACCCTTCGTAGAGAAGCTGATGTCAAGAAA
AGGATCAAGGATGCCAAGCAGCGAGCTCTCAAAGAACCCAAGGAACTTAATTTTGTTTTTGGGGTCAATA
TTGAACACCGGGACTTAGATGGCATGTTTATCTACAACTGTAGCCGCCTGATCAAGATGTATGAGAAAGT
GGGCCCACAGCTGGAAGGGGGCATGGCATGTGGTGGGGTTGTTGGGGTTGTTGATGTACCCTACTTGGTT
CTGGAGCCTACACATAACAAGCAGGACTTTGCTGATGCTAAGGAGTACCGGCATCTACTTCGAGCAATGG
GGGAGCACTTGGCACAGTACTGGAAGGACATAGCCATTGCCCAGCGTGGAATCATCAAGTTTTGGGATGA
GTTTGGCTATCTTTCTGCCAACTGGAACCAACCTCCATCTAGTGAGCTGCGTTTCAAACGCCGGAGAGCT
ATGGAAATTCCAACCACTATCCAGTGTGATCTGTGTCTGAAATGGAGGACTCTCCCCTTCCAGCTGAGTT
CAGTAGAAACAGATTACCCTGATACTTGGGTTTGCTCCATGAACCCTGATCCTGAGCAGGACCGCTGTGA
AGCTTCTGAACAGAAGCAAAAGGTTCCTTTGGGGACATTAAAAAAGGACCCAAAGACACAGGAAGAAAAG
CAGAAGCAGCTGACAGAGAAAATTCGCCAGCAGCAGGAAAAGCTAGAAGCTCTTCAGAAAACCACGCCCA
TCCGCTCACAAGCTGACCTGAAGAAATTGCCCTTAGAAGTGACTACAAGACCTATTGAAGAACCTGTACG
GAGACCTCAGCGTCCTCGGTCACCTCCTTTACCTGCGGTGATCAAGAATGCTCCTAGCAGACCCCCTTCT
ATTCAGACTCCCAGACCAAGTACCCAGCTCCGAAAGACGTCTGTTATCAGCCTTCCAAAACCACCCACTA
CAGCAGCCCGAGGAGAAACTAGTACTTCTAGGCTACTCCAGCCAACTGAGGCACCTCGAAAGCCTGCAAA
CCCTCCCATCAAGACTGTACCCCGACCCACCCCTCCTGTGCACACACCCCCACTATCTTTAATCCCCAGT
TCCAAGAGCCTTCGGGAGGTCCCTGCTCAAAAAGCCATCAAAACTCCAGTGGTCAAGAAGCCAGAGCCAC
CTGTCAAACAGTCCGTGGCAACCTCAGGTCGGAAGCGGAGTCTTGCAGTCTCAGATGAGGAAGAGGCTGA
AGAAGAAGCTGAGAAGAGGAGAGAGAGATGCAAGCGGGGCAAACTTGCTGTGAAGGAGGAAAAGAAGGAA
GCAAATGAGCTCTCAGACAGTGCTGGGGAAGATCACCCAGCTGAACTCAGGAAGGCTCAGAAAGATAAAG
GACTTCATGTAGAGGTCCGTGTGAACCGTGAGTGGTACACAGGCCGAGTCACAGCTGTGGAGGTGGGCAA
GAATGCGGTTCGATGGAAAGTGAAGTTTGACTATGTGCCCACAGATACAACACCAAGAGACCGCTGGGTG
GAGAAAGGCAGTGAAGATGTACGATTGATGAAGCCACCTTCCCCAGAGCATCAGAGCCCTGACACACAGC
AAGAAGGTGGAGAGGAGGAGGAGGCTATGGTGGCCCGGCAGGCTGTGGCCTTGCCTGAGCCTTCCACCTC
TGATGGTCTTCCCATTGAGCCTGATACCACTGCCACCAGTCCCAGCCATGAGACTATTGATCTCCTGGTC
CAGATTCTTCGAAATTGCTTGCGGTATTTCTTACCTCCAAGTTTCCCCATCTCCAAGAAGGAGCTGAGTG
TTATGAATTCAGAAGAACTAATATCTTTTCCTCTGAAAGAATACTTCAAGCAATATGAGGTGGGGCTCCA
GAATCTGTGCCATTCCTACCAAAGCCGTGCTGATTCACGGGCAAAAGCCTCAGAGGAGAGCTTACGCACA
TCAGAGAAAAAGCTTCGTGAGACAGAGGAGAAGTTACAGAAGTTGAGGACCAACATTGTAGCACTCCTGC
AAAAAGTGCAGGAGGACATAGACATCAACACAGATGATGAGCTGGATGCTTACATTGAGGACCTCATCAC
CAAAGGGGACTGA

Translation (1030 aa):
MAFTNYSSLNRAQLTFEYLHTNSTTHEFLFGALAELVDNARDADATRIDIYAERREDLRGGFMLCFLDDG
AGMDPSDAASVIQFGKSAKRTPESTQIGQYGNGLKSGSMRIGKDFILFTKKEDTMTCLFLSRTFHEEEGI
DEVIVPLPTWNARTREPITDNVEKFAIETELVYKYSPFHTEEQVMNQFMKIPGNSGTLVIIFNLKLMDNG
EPELDIISNPKDIQMAETSPEGTKPERRSFRAYAAVLYIDPRMRIFIHGHKVQTKRLSCCLYKPRMYKYT
SSRFKTRAEQEVKKAEHVARIAEEKAREAESKARTLEVRMGGDLTRDSRVMLRQVQNTAITLRREADVKK
RIKDAKQRALKEPKELNFVFGVNIEHRDLDGMFIYNCSRLIKMYEKVGPQLEGGMACGGVVGVVDVPYLV
LEPTHNKQDFADAKEYRHLLRAMGEHLAQYWKDIAIAQRGIIKFWDEFGYLSANWNQPPSSELRFKRRRA
MEIPTTIQCDLCLKWRTLPFQLSSVETDYPDTWVCSMNPDPEQDRCEASEQKQKVPLGTLKKDPKTQEEK
QKQLTEKIRQQQEKLEALQKTTPIRSQADLKKLPLEVTTRPIEEPVRRPQRPRSPPLPAVIKNAPSRPPS
IQTPRPSTQLRKTSVISLPKPPTTAARGETSTSRLLQPTEAPRKPANPPIKTVPRPTPPVHTPPLSLIPS
SKSLREVPAQKAIKTPVVKKPEPPVKQSVATSGRKRSLAVSDEEEAEEEAEKRRERCKRGKLAVKEEKKE
ANELSDSAGEDHPAELRKAQKDKGLHVEVRVNREWYTGRVTAVEVGKNAVRWKVKFDYVPTDTTPRDRWV
EKGSEDVRLMKPPSPEHQSPDTQQEGGEEEEAMVARQAVALPEPSTSDGLPIEPDTTATSPSHETIDLLV
QILRNCLRYFLPPSFPISKKELSVMNSEELISFPLKEYFKQYEVGLQNLCHSYQSRADSRAKASEESLRT
SEKKLRETEEKLQKLRTNIVALLQKVQEDIDINTDDELDAYIEDLITKGD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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