NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS37011.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37011.1 Public Mus musculus 14 Dzip1 23 108 98 CCDS HistoryNCBI Gene:66573Re-query CCDS DB by CCDS ID:37011.1Re-query CCDS DB by GeneID:66573See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37011.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000004055.9 ENSMUSP00000004055.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000004055.9Link to Ensembl Protein Viewer:ENSMUSP00000004055.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000004055Re-query CCDS DB by Protein ID:ENSMUSP00000004055
Original member Current member EBI ENSMUST00000047208.11 ENSMUSP00000039689.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000047208.11Link to Ensembl Protein Viewer:ENSMUSP00000039689.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000047208Re-query CCDS DB by Protein ID:ENSMUSP00000039689
Original member Current member NCBI NM_025943.3 NP_080219.2 Accepted alive Link to Nucleotide Sequence:NM_025943.3Link to Protein Sequence:NP_080219.2Re-query CCDS DB by Nucleotide ID:NM_025943Re-query CCDS DB by Protein ID:NP_080219Link to BLAST:NP_080219.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_080219.2 852 Q8BMD2-1 852 100% 0 0

Chromosomal Locations for CCDS 37011.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 118877183 118877262 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 118879344 118879512 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 118881010 118881140 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 118883365 118883567 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 118885606 118885659 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 118886498 118886627 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 118887068 118887230 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 118889256 118889392 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 118891770 118891832 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 118895851 118895907 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 118899986 118900042 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 118901501 118901549 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 118902015 118902155 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 118906895 118906957 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 118909434 118909571 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 118911342 118911503 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 118912442 118912566 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 118915190 118915274 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 118922243 118922791 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 118922911 118922913 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2559 nt):
ATGCCCTTCCAGAAGCACGTCTACTACCCTCTGGCCAACAGCCCCGAGGGGCCTGACGCCTCTGCCATAG
GCGCGGCTCCCATGGCCTTTGTCCCCCCCAGCGCGGCCTCGGGCCCCCTGCCCTTCTTCCAGTTCCGGCC
GCGACTGGAGAGCGTGGACTGGAGGCGGCTGAGCGCCATCGACGTGGACAAGGTTGCCGGCGCCGTGGAC
GTCCTGACACTGCAGGAGAACATTATGAACATCACCTTCTGCAAGCTGGAGGACGAGAAGTGCCCGCACT
GCCAGTCAGGGGTAGACCCAGTGCTGCTGAAGCTGATCCGCCTGGCGCAGCTCACGATCGAATACCTGAT
GCACTCGCAGGAGTTCCTCACCTCGCAGCTAAACCTGGTGGAGGAGAGGCTGCGCCTGAGCCTGCTCGAC
TATGAGCAGAGCAAGCAGCTGCTCACCAAGCAGGCTGGCGAGATCAAGCTGCTGAAGGAGGAGTGTAAAC
GCAGGAAGAAGATGCTGTCCACGCAGCAGCTGATGATAGAGGCCAAGGCCAGCTATTACCAGTGCCATTT
CTGTGACAAGGCCTTTATGAACCAAGCGTTCCTACAAAGCCACATCCAGCGCCGCCATACTGAAGACTCT
CACCTCGAGTATAATACAAAGGCCCAGACCGACAGGCTCCAGAAGGAGATTGACATGTTGAAGGAACAGC
TGCAGCTCACTAGGTCTCAGCTGGAGTCTGCACAGCACTCTCATGCAGTTCGCTTCTCTAAGGACTATGA
AATGCAGAAATCAAAAGAGGAAGACTTTCTGAAGCTGTTTGACAGATGGAAAGAGGAGGAGAAGGAGAAG
TTACTCGAGGAGATGGAGAAGGTCAAGGGGATGTTTATGAGGGAATTTAAAGAGTTAACTTCTAAGAACT
CAGCATTAGAATATCAGTTGTTAGAAATACAGAAGTCTAACATCCAGATCAAGTCCAACATAGGCACCTT
AAGAGACGTTACTGAGCTGAGAGAAGACCATCTTCCGTGTCCCCAGGACTTCCAGAACATGCTACAGCTG
CTTGACAGCCAGGCAAGCAAGTGGACAGATCGATTTCAAGTTCTCAACGAAGAACACAGCAAGGAAAAGG
GGCAGCTCCTGTCCCACATAGAGAAGCTTCGAAGCTCAATGATGAAGGATTTAAGTGCAGATAATGTCTT
CTACAAGAGGCGGGTAGAAGAGTTAGGCCAGAAACTGCAGGAGCAGAACGAGCTGATTATCAGTCAGAAG
CAGCAGATTAGAGAATTTGCCAGTAAACCATACAGCAGCATCAGCGAGCTGAAAGGGACTCCTTTAACCC
GACAAACACTGGAACCTAAATCGGCTGCACCAACCACACCCATGACTGCCTCGGCCACACAGAATCTGGA
TGGTGCATCCAGCCTGACCATGGTACATGAGCAAGTGTTCTCTTCACACATACTGGAACCAATAGAAGAA
CTTTCTTCAGAGGAGGAAAAAGGTCGAGAAAATGAGCAGAAATTAAATAAAAAGACGTCCTTAAGGAAAC
CGTCGAGCACCAGCCCATCCCCCCAGGAGCTGAGGACTAACCTGGAGCGGGAGCTGGGGAATAAACTAAG
AAGCTTTGGGATTGGCGCGAACATCCAAGGTATTCCGTGCGAGATCTTGAATAGATCGCTTAAAGCCATG
CAAGTTGCCAGACATGACCTAGCAAAACAAATGCCTGACATCCAGCAAATCCGAGAATCCCTCGAGCACC
AGCTGATCTGTAAGATGGAGGAAAAAGTGTCACTCTCTTCAGACAGGCACCATGTCCCTTCCATGACCAC
CTTTCCACCCGAAGAAGTACCCAAGGCAACCCAGCTTCCCCACAAAAGCAGACCGTTGGTCAGACAGAGA
ACTGTGTTTACTGATAAAGTGTCTGTCCCAAAACTTAAGAAAAATACCAAAGAAAGTCATTTTCTCAGAA
GGTTTCCATCCACCAAGACGCCTCCCTTCAGCTCGGAAGAGGAGCCAGATGAAGAGGACCTCCTCCATGC
TTACCTCTCCCCAGACTCACTTGCCACCGCTGCCACACAGCCACCTAAAAGCAGCATGAGTCACTTTGGA
AAGAGCGCTGTCAAAAGTGACACGGACTGGACGGAGGGAAGTGAAATGGATGACTCGGACTTCTCTCCTA
AGCTGACAGGAACCTCCATTACGATACAGACTGACACTGTTGAGACCATGGCTTTACCCCAAGGAAGTGG
GAATAAAGCAGTGCCGGGAATGAACCCTGCTGACACGGTTATCAAAAAGGAATCGTTGCAAGAGTTAAAG
TGCACAGATGCTGATGACGAGGACTGGGATATATCGTCCTTAGAGGAAGAGAAGTCTCTGGGGAGTAAAA
TAGAGCAGAGGGAGCCGCCTCCGGCCAAGCGGGACCCCAGCTGCACCCAGGTGCAGAGGGCCTGGGGCCC
AGTGAACCCTCGGGAATTCAAGGAAGAAGGACTTCATGAAAACGAACCGAGCACACTCAAGAGCAACTTA
GTCACTGTGACTGACTGGAGCGATGTCCTGGATGTCTAA

Translation (852 aa):
MPFQKHVYYPLANSPEGPDASAIGAAPMAFVPPSAASGPLPFFQFRPRLESVDWRRLSAIDVDKVAGAVD
VLTLQENIMNITFCKLEDEKCPHCQSGVDPVLLKLIRLAQLTIEYLMHSQEFLTSQLNLVEERLRLSLLD
YEQSKQLLTKQAGEIKLLKEECKRRKKMLSTQQLMIEAKASYYQCHFCDKAFMNQAFLQSHIQRRHTEDS
HLEYNTKAQTDRLQKEIDMLKEQLQLTRSQLESAQHSHAVRFSKDYEMQKSKEEDFLKLFDRWKEEEKEK
LLEEMEKVKGMFMREFKELTSKNSALEYQLLEIQKSNIQIKSNIGTLRDVTELREDHLPCPQDFQNMLQL
LDSQASKWTDRFQVLNEEHSKEKGQLLSHIEKLRSSMMKDLSADNVFYKRRVEELGQKLQEQNELIISQK
QQIREFASKPYSSISELKGTPLTRQTLEPKSAAPTTPMTASATQNLDGASSLTMVHEQVFSSHILEPIEE
LSSEEEKGRENEQKLNKKTSLRKPSSTSPSPQELRTNLERELGNKLRSFGIGANIQGIPCEILNRSLKAM
QVARHDLAKQMPDIQQIRESLEHQLICKMEEKVSLSSDRHHVPSMTTFPPEEVPKATQLPHKSRPLVRQR
TVFTDKVSVPKLKKNTKESHFLRRFPSTKTPPFSSEEEPDEEDLLHAYLSPDSLATAATQPPKSSMSHFG
KSAVKSDTDWTEGSEMDDSDFSPKLTGTSITIQTDTVETMALPQGSGNKAVPGMNPADTVIKKESLQELK
CTDADDEDWDISSLEEEKSLGSKIEQREPPPAKRDPSCTQVQRAWGPVNPREFKEEGLHENEPSTLKSNL
VTVTDWSDVLDV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH