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Report for CCDS41657.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
41657.1 Public Homo sapiens 11 CSKMT 24 110 108 CCDS HistoryNCBI Gene:751071Re-query CCDS DB by CCDS ID:41657.1See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 41657.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000532971.2 ENSP00000431287.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000532971.2Link to Ensembl Protein Viewer:ENSP00000431287.1Re-query CCDS DB by Nucleotide ID:ENST00000532971Re-query CCDS DB by Protein ID:ENSP00000431287
Original member Current member NCBI NM_001043229.2 NP_001036694.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001043229.2Link to Protein Sequence:NP_001036694.1Re-query CCDS DB by Nucleotide ID:NM_001043229Re-query CCDS DB by Protein ID:NP_001036694Link to BLAST:NP_001036694.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001036694.1 240 A8MUP2 240 100% 0 0

Chromosomal Locations for CCDS 41657.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 62665880 62665946 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62666396 62667051 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (723 nt):
ATGGCCGCGCTGCGTCGAATGCTCCACTTGCCGAGCCTGATGATGGGGACGTGCCGCCCCTTTGCGGGCT
CACTGGCTGATAGTTGCCTGGCGGACCGCTGTCTCTGGGATCGGCTGCATGCCCAGCCTCGTTTGGGCAC
TGTCCCCACCTTCGACTGGTTCTTTGGATACGACGAAGTCCAGGGGCTCCTACTGCCATTGCTGCAGGAG
GCACAGGCTGCCAGTCCTCTGCGAGTGCTGGATGTGGGCTGTGGGACTTCCAGCCTATGTACAGGCCTCT
ACACCAAATCTCCACACCCAGTGGATGTGCTGGGGGTGGACTTTTCTCCTGTGGCTGTGGCCCACATGAA
TAGCCTCCTGGAGGGTGGCCCAGGCCAAACACCTCTATGCCCTGGACACCCTGCCTCAAGCCTCCACTTC
ATGCACGCCGATGCTCAGAACCTGGGGGCTGTGGCTTCTTCAGGCTCTTTCCAACTACTGCTGGACAAAG
GCACATGGGATGCTGTTGCCCGGGGAGGTCTGCCTAGGGCTTACCAGCTTCTATCAGAATGCTTGAGGGT
TCTAAACCCTCAGGGGACCCTGATTCAGTTCTCAGATGAGGACCCTGATGTGCGACTGCCCTGCCTGGAA
CAAGGGTCCTATGGCTGGACTGTGACTGTGCAGGAGCTAGGCCCGTTCAGGGGCATCACCTACTTTGCTT
ACTTGATTCAAGGCTCTCATTAA

Translation (240 aa):
MAALRRMLHLPSLMMGTCRPFAGSLADSCLADRCLWDRLHAQPRLGTVPTFDWFFGYDEVQGLLLPLLQE
AQAASPLRVLDVGCGTSSLCTGLYTKSPHPVDVLGVDFSPVAVAHMNSLLEGGPGQTPLCPGHPASSLHF
MHADAQNLGAVASSGSFQLLLDKGTWDAVARGGLPRAYQLLSECLRVLNPQGTLIQFSDEDPDVRLPCLE
QGSYGWTVTVQELGPFRGITYFAYLIQGSH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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