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Report for CCDS48932.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
48932.2 Reviewed, update pending Mus musculus 11 Hspb9 23 108 98 CCDS HistoryNCBI Gene:75482Re-query CCDS DB by CCDS ID:48932.2See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 48932.2

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000017976.2 ENSMUSP00000017976.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000017976.2Link to Ensembl Protein Viewer:ENSMUSP00000017976.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000017976Re-query CCDS DB by Protein ID:ENSMUSP00000017976
Original member Current member NCBI NM_029307.2 NP_083583.2 Pending alive Link to Nucleotide Sequence:NM_029307.2Link to Protein Sequence:NP_083583.2Re-query CCDS DB by Nucleotide ID:NM_029307Re-query CCDS DB by Protein ID:NP_083583Link to BLAST:NP_083583.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_083583.2 168 Q9DAM3 168 100% 0 0

Chromosomal Locations for CCDS 48932.2

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 100713943 100714449 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (507 nt):
ATGCAGCGGGTAGGAAGCAGTTTCTCCACCGGGCAGCGCGAACCCGGGGAAAACCGGGTAGCTTCCCGAT
GTCCCAGCGTGGCCCTTGCTGAACGGAATCAAGTGGCCACTCTACCAGTGAGGCTGCTCAGGGATGAGGT
GCAGGGCAATGGCTGTGAGCAACCAAGTTTCCAAATAAAGGTGGATGCCCAAGGTTTCGCTCCGGAGGAC
TTGGTGGTGCGGATAGACGGCCAGAATCTGACGGTGACCGGCCAGCGGCAACACGAGTCGAATGACCCGA
GCAGGGGCCGCTACCGCATGGAGCAGAGTGTTCACCGACAAATGCAGCTCCCGCCGACCTTAGATCCTGC
AGCCATGACCTGCAGCCTGACCCCCTCTGGCCATCTGTGGCTCAGGGGACAAAACAAGTGCCTACCTCCC
CCTGAAGCTCAAACAGGCCAGTCCCAGAAACCCAGGAGGGGAGGGCCTAAGAGCTCCTTACAAAACGAAA
GTGTGAAGAATCCTTAG

Translation (168 aa):
MQRVGSSFSTGQREPGENRVASRCPSVALAERNQVATLPVRLLRDEVQGNGCEQPSFQIKVDAQGFAPED
LVVRIDGQNLTVTGQRQHESNDPSRGRYRMEQSVHRQMQLPPTLDPAAMTCSLTPSGHLWLRGQNKCLPP
PEAQTGQSQKPRRGGPKSSLQNESVKNP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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