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Report for CCDS52774.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
52774.1 Public Mus musculus 9 Tmem225 23 108 98 CCDS HistoryNCBI Gene:75667Re-query CCDS DB by CCDS ID:52774.1See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 52774.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000046333.8 ENSMUSP00000036816.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000046333.8Link to Ensembl Protein Viewer:ENSMUSP00000036816.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000046333Re-query CCDS DB by Protein ID:ENSMUSP00000036816
Original member Current member NCBI NM_029379.1 NP_083655.1 Accepted alive Link to Nucleotide Sequence:NM_029379.1Link to Protein Sequence:NP_083655.1Re-query CCDS DB by Nucleotide ID:NM_029379Re-query CCDS DB by Protein ID:NP_083655Link to BLAST:NP_083655.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_083655.1 230 Q9D9S2 230 100% 0 0

Chromosomal Locations for CCDS 52774.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 40148326 40148506 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 40149328 40149474 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 40149727 40149861 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 40150555 40150784 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (693 nt):
ATGATGCACATCCCAAACAGAAGTATCCAGGCTGCCAACATATTCTTCTCCTCTGGTGCCATACTTCTGT
TGATAGTAGGACTCATCATGGAAGACTGGGTGGAACTGATTCCCAAAGTGAGAAAGGATAAAACTACTCA
CAGTCCATGGCTGGGATGCTGTCCTCCTTTTTGGCCCGAAGAGAGCCTGGAGGTGGTCAGGCGGATAATG
AGGATGACTCTCAACATTTCCATCTATCTAAACTTGATCATAGGTTTGCAGTTCTCCTATATGATTTCTC
AAAACAAGTGTGTGCATCTCCTTGTTGGCTTCCTGAGTTTCTTCGCAGGTTGCCTTTTGTTCTATGCGAT
CATTGTGTATCACCACAAGCTAAATAAAGGTCAATATGTGTACTTCGTTAATTACAAGACCAAGTGGATA
GCTTTCACTGTCTACTTAACAATCGCCCTCTTTCTTACCTGTGGTATCTTCTGTTTCATACAGAGCACAA
ATAGATGCGAATGCATGAAATTCTGTATACCCCACACAGAAAGTAAAAGCCAAGAAATGATTCCGAGTAC
AATCGAAGTTGTTTCACTTCCGCCACGATGTGCAATGCCTCGAAGCATCGTCCATGTGCACTCTGTGACC
TCAAAGGATGGCTCCTTAAATAGACCACACACCCAAGCACGTCGGGTAACCTGGGCTCTGTGA

Translation (230 aa):
MMHIPNRSIQAANIFFSSGAILLLIVGLIMEDWVELIPKVRKDKTTHSPWLGCCPPFWPEESLEVVRRIM
RMTLNISIYLNLIIGLQFSYMISQNKCVHLLVGFLSFFAGCLLFYAIIVYHHKLNKGQYVYFVNYKTKWI
AFTVYLTIALFLTCGIFCFIQSTNRCECMKFCIPHTESKSQEMIPSTIEVVSLPPRCAMPRSIVHVHSVT
SKDGSLNRPHTQARRVTWAL


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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